Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010301.1 Kokia drynarioides strain JFW-HI SEQ_125158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64724

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--124
2
13.5
2
100
0
54
51
0
0
48
1.00
575--608
17
1.9
18
88
5
52
44
0
20
35
1.52
907--943
18
2.1
18
89
0
56
48
0
27
24
1.51
4156--4221
23
2.8
24
74
21
75
48
1
0
50
1.10
4159--4221
24
2.6
25
76
16
78
47
1
0
50
1.10
5522--5546
7
3.6
7
100
0
50
84
0
0
16
0.63
10402--10426
13
1.9
13
100
0
50
64
0
12
24
1.27
11283--11329
18
2.7
17
75
15
51
46
6
2
44
1.40
11515--11562
17
2.7
18
78
12
55
52
2
2
43
1.24
11515--11570
19
3.1
19
73
19
57
55
1
1
41
1.21
12751--12922
90
1.9
89
86
3
247
35
3
22
38
1.71
12721--12932
30
7.1
30
84
2
221
37
3
21
37
1.72
14599--15267
40
16.9
40
77
6
405
25
18
25
31
1.97
14600--15267
79
8.4
78
73
10
268
25
18
25
31
1.97
14599--15283
119
5.8
120
81
3
615
25
17
25
31
1.97
14646--15283
159
4.0
159
83
3
736
26
17
24
31
1.97
15339--15443
48
2.1
50
82
3
124
22
22
17
37
1.94
27057--27291
29
8.0
30
73
8
142
37
3
18
40
1.69
27054--27291
30
8.1
30
76
8
193
36
4
18
40
1.71
27054--27284
58
3.9
59
77
5
218
37
3
17
41
1.68
28432--28510
20
4.2
19
85
12
85
60
2
0
36
1.10
28421--28510
9
9.3
10
70
22
59
62
2
0
35
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28453--28503
26
2.0
26
84
7
68
58
1
0
39
1.09
28421--28532
39
3.0
36
79
18
113
60
1
1
35
1.17
28445--28532
9
9.4
9
69
23
58
56
2
2
38
1.24
28445--28532
19
4.8
16
77
20
68
56
2
2
38
1.24
36829--37066
120
2.0
120
83
0
296
31
24
13
30
1.93
40544--40582
20
2.0
20
89
0
60
30
25
12
30
1.93
43730--43769
21
1.9
21
89
0
62
27
10
22
40
1.86
44412--44480
31
2.2
32
87
7
97
28
14
10
46
1.77
44628--44799
59
2.9
60
85
5
206
48
9
16
25
1.75
45994--46039
15
3.2
14
81
12
58
69
2
2
26
1.11
45995--46039
14
3.2
13
84
9
54
68
2
2
26
1.12
49950--49996
15
2.8
17
78
15
53
65
2
2
29
1.15
52053--52294
119
2.0
119
98
0
466
35
23
10
30
1.88
55510--55549
19
2.0
21
90
9
66
62
0
0
37
0.95
55521--55550
15
2.1
14
93
6
51
60
0
0
40
0.97
55790--55918
60
2.1
61
80
5
136
38
13
6
41
1.71
57978--58022
6
7.5
6
89
0
63
46
0
31
22
1.52
61885--61924
19
2.0
21
90
9
66
62
0
0
37
0.95
61896--61925
15
2.1
14
93
6
51
60
0
0
40
0.97
62165--62293
60
2.1
61
80
5
136
38
13
6
41
1.71
64353--64397
6
7.5
6
89
0
63
46
0
31
22
1.52

Tables:   1

The End!