Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010331.1 Kokia drynarioides strain JFW-HI SEQ_125196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31438

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--442
4
19.0
4
75
15
50
0
28
0
72
0.86
380--439
13
4.7
13
80
12
61
0
26
0
73
0.84
1677--1717
16
2.5
17
84
7
50
68
4
0
26
1.10
5891--5915
12
2.1
12
100
0
50
12
48
16
24
1.79
14937--15284
29
11.8
29
70
14
135
35
4
26
33
1.78
14937--15304
118
3.1
115
81
5
389
35
4
26
32
1.78
15004--15313
59
5.2
59
81
3
300
37
3
24
34
1.74
15032--15326
29
10.0
28
75
10
169
37
3
25
33
1.74
16113--16196
44
1.9
43
97
0
150
17
20
21
39
1.92
16305--16399
3
31.0
3
76
8
75
34
2
2
61
1.20
16508--16553
19
2.4
19
100
0
92
26
17
21
34
1.95
16982--17065
6
14.7
6
71
22
65
51
2
1
45
1.22
16984--17066
17
4.9
17
85
5
114
51
2
1
44
1.22
16984--17066
34
2.4
34
89
0
130
51
2
1
44
1.22
17638--17735
37
2.6
37
90
0
142
23
20
20
35
1.96
17703--18096
119
3.3
119
68
12
352
23
20
19
36
1.95
17426--18182
242
3.1
242
89
1
1083
22
20
19
37
1.95
17880--17976
37
2.6
37
88
0
140
25
20
17
36
1.94
17917--18620
205
3.4
205
92
1
1153
22
22
19
36
1.96
18604--18630
10
2.7
10
100
0
54
7
29
18
44
1.77
30318--30771
117
3.8
117
80
8
315
31
3
28
35
1.76
30303--30770
29
15.9
29
73
11
278
32
4
28
35
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30390--30775
59
6.6
59
81
7
383
32
3
29
35
1.75

Tables:   1

The End!