Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010332.1 Kokia drynarioides strain JFW-HI SEQ_125197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55431

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12932--13027
44
2.2
44
85
7
124
13
34
22
29
1.93
13044--13212
30
5.7
30
85
0
214
15
24
20
39
1.91
15149--15231
16
5.3
15
69
17
53
30
1
3
65
1.17
15155--15194
18
2.2
18
86
0
53
32
0
0
67
0.91
15192--15235
23
1.9
23
85
0
61
27
4
6
61
1.41
16396--16454
30
2.0
30
83
3
75
33
13
28
23
1.93
16406--16463
30
2.0
30
82
3
73
31
15
27
25
1.96
16459--16654
29
6.8
29
75
11
170
34
2
28
34
1.71
16459--16666
57
3.6
58
79
9
187
34
2
27
35
1.72
16443--16666
29
7.7
29
72
14
158
34
3
28
33
1.75
17980--19485
209
7.2
209
84
3
1764
21
22
18
36
1.95
17980--19483
419
3.6
418
84
2
1898
22
22
18
37
1.95
17973--19485
628
2.4
625
84
2
1944
21
22
19
37
1.95
28093--28127
2
17.5
2
93
0
61
51
0
0
48
1.00
28743--29055
29
10.7
29
71
10
170
38
3
22
35
1.72
28829--29025
59
3.3
59
78
8
206
37
3
22
36
1.72
28773--29025
88
2.9
87
73
9
226
38
3
21
35
1.71
30124--30173
3
16.7
3
100
0
100
32
0
0
68
0.90
30824--30886
6
10.8
6
76
6
67
53
1
3
41
1.26
30844--30886
11
3.8
11
81
6
50
55
2
2
39
1.25
30824--30870
17
2.7
18
90
6
78
53
2
4
40
1.32
30861--30903
17
2.6
16
85
7
50
51
2
2
44
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30838--30886
23
2.1
23
92
0
80
55
2
2
40
1.23
31183--31239
21
2.7
21
77
2
60
47
1
5
45
1.35
31401--31451
26
2.0
27
88
7
79
47
1
1
49
1.24
31555--31596
15
2.6
16
77
14
50
23
7
4
64
1.38
33566--33644
31
2.6
29
75
9
68
35
11
11
41
1.77
39352--39395
22
2.0
21
82
4
52
34
6
0
59
1.24
39463--39548
42
2.0
42
100
0
172
37
23
16
23
1.94
42053--42089
13
2.7
14
84
16
51
51
0
0
48
1.00
42547--42573
2
13.5
2
100
0
54
48
0
0
51
1.00
42928--43009
33
2.6
32
76
3
85
29
9
9
51
1.67
44033--44351
29
10.9
29
76
9
220
32
3
27
36
1.73
44022--44354
58
5.7
57
77
10
323
31
3
28
36
1.72
44014--44350
30
11.4
30
77
8
255
31
2
27
37
1.72
45084--45156
25
2.9
25
84
10
103
9
27
1
61
1.35
45084--45159
26
3.0
25
85
11
102
13
26
1
59
1.42
46126--46183
17
3.4
17
78
9
55
51
5
3
39
1.41
46798--47555
205
3.7
205
93
0
1223
22
21
19
36
1.95
48048--48099
27
2.0
26
92
3
86
61
9
17
11
1.55

Tables:   1

The End!