Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01010339.1 Kokia drynarioides strain JFW-HI SEQ_125206, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 30579
ACGTcount: A:0.31, C:0.17, G:0.18, T:0.34


Found at i:13393 original size:24 final size:24

Alignment explanation


    Indices: 13366--13412  Score: 94
    Period size: 24  Copynumber: 2.0  Consensus size: 24

      13356 GGTTGAACGG

                                    
      13366 ATTTAAGTATGATATTAATATATA
          1 ATTTAAGTATGATATTAATATATA

                                   
      13390 ATTTAAGTATGATATTAATATAT
          1 ATTTAAGTATGATATTAATATAT

      13413 TTTATGTTTG


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  24   23  1.00

ACGTcount: A:0.45, C:0.00, G:0.09, T:0.47


Consensus pattern (24 bp):   
ATTTAAGTATGATATTAATATATA

Done.