Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001036.1 Kokia drynarioides strain JFW-HI SEQ_112263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85219

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11939--11975
4
9.2
4
93
0
56
51
29
0
18
1.47
29681--29720
19
2.0
21
85
9
57
30
27
0
42
1.56
32297--32361
17
3.6
18
87
8
96
40
1
0
58
1.07
32300--32376
35
2.2
35
86
9
104
41
3
0
54
1.19
32297--32379
20
4.3
20
86
7
86
40
3
0
55
1.17
32297--32361
6
10.7
6
71
15
53
40
1
0
58
1.07
35554--35590
17
2.0
20
85
15
53
35
5
0
59
1.20
35558--35593
17
2.1
17
100
0
72
36
5
0
58
1.22
38545--38631
43
2.0
43
100
0
174
27
4
22
44
1.72
38554--38626
24
3.2
24
64
25
68
28
4
23
43
1.72
40251--40293
8
5.5
8
88
2
52
62
0
0
37
0.95
44250--44314
34
1.9
34
96
0
121
63
4
6
26
1.38
54742--54812
30
2.4
30
97
0
133
19
47
14
18
1.82
59707--59737
16
1.9
16
93
0
53
54
6
0
38
1.26
59982--60013
15
2.2
14
94
5
55
34
6
0
59
1.23
71039--71085
6
7.8
6
85
0
67
31
2
4
61
1.27
84566--84608
22
2.0
22
86
9
61
69
4
0
25
1.07

Tables:   1

The End!