Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010362.1 Kokia drynarioides strain JFW-HI SEQ_125233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86795

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
559--904
30
11.8
29
80
6
376
36
30
2
31
1.70
559--907
59
5.9
59
89
1
477
36
30
2
31
1.71
559--1025
117
4.0
116
81
7
491
35
29
3
32
1.75
559--940
176
2.2
175
84
3
471
35
29
2
31
1.72
559--997
176
2.5
175
79
8
469
35
30
3
31
1.75
6202--6296
49
2.0
47
85
8
129
63
7
1
28
1.28
6408--6487
20
3.8
20
76
12
79
68
20
3
7
1.29
6421--6566
56
2.6
56
80
9
167
68
19
5
6
1.33
6422--6535
12
9.8
12
71
10
85
67
19
6
7
1.36
6408--6566
44
3.6
44
74
10
119
67
19
5
7
1.34
6421--6578
21
7.1
22
70
18
69
68
19
5
6
1.32
6520--6589
21
3.3
22
80
9
67
71
15
2
10
1.25
16303--16350
20
2.3
20
79
13
53
47
0
2
50
1.12
18008--18054
22
2.1
22
96
0
85
12
23
12
51
1.74
23960--24084
63
2.0
63
98
0
241
25
12
15
46
1.81
26478--26553
24
3.1
24
84
1
89
26
5
7
60
1.46
26698--26728
14
2.2
14
94
0
53
12
3
19
64
1.41
29668--30099
214
2.1
207
90
3
677
28
18
15
37
1.91
37749--37774
13
2.0
13
100
0
52
30
15
15
38
1.88
38638--38697
28
2.4
24
83
13
68
38
13
18
30
1.89
38647--38702
28
2.0
28
100
0
112
39
14
17
28
1.89
46657--46736
39
2.0
40
95
2
144
30
22
17
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46661--46753
39
2.4
38
85
7
107
30
23
17
29
1.97
51602--51677
39
1.9
40
94
2
136
31
23
14
30
1.94
51602--51694
39
2.4
38
85
7
107
31
23
16
29
1.96
57291--57320
15
2.0
15
93
0
51
50
0
33
16
1.46
73672--73701
15
2.1
14
93
6
51
50
13
13
23
1.77
74390--74439
24
2.1
25
85
14
70
6
6
22
66
1.36
74395--74450
23
2.4
23
82
8
60
5
8
25
60
1.47
74457--74500
12
3.7
12
84
0
61
4
4
22
68
1.27
74457--74529
24
3.2
23
77
11
80
4
5
20
69
1.25
74457--74529
12
6.5
11
75
10
51
4
5
20
69
1.25
75070--75098
13
2.2
13
100
0
58
34
6
6
51
1.55
79355--79599
28
8.6
28
65
10
93
29
24
15
30
1.96
79384--79628
57
4.3
56
80
5
222
29
25
15
29
1.96
79355--79625
114
2.4
113
82
3
285
29
24
16
29
1.96
79464--79550
29
3.0
29
68
9
70
31
22
14
31
1.95
79583--79651
29
2.4
29
82
2
77
31
24
21
21
1.98
79595--79652
29
2.0
29
86
0
80
31
22
18
27
1.97

Tables:   1

The End!