Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010378.1 Kokia drynarioides strain JFW-HI SEQ_125251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88898

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
529--577
4
12.0
4
86
4
53
2
28
0
69
1.00
3817--3875
22
2.7
22
78
19
70
55
0
3
40
1.16
6804--6865
32
1.9
32
83
9
81
22
1
6
69
1.20
6996--7040
23
2.0
23
95
0
81
60
2
2
35
1.22
10028--10060
15
2.3
15
89
5
50
24
0
3
72
0.98
11255--11295
18
2.2
19
86
4
57
29
12
19
39
1.88
29120--29182
19
3.3
20
79
16
64
50
0
0
49
1.00
35919--35965
24
2.0
24
83
8
60
14
6
27
51
1.67
37238--37370
61
2.2
58
85
6
178
51
2
3
42
1.29
39327--39384
31
1.9
30
86
10
82
37
3
5
53
1.40
39478--39534
18
3.3
18
69
14
57
56
1
1
40
1.20
39478--39540
33
1.9
33
90
0
99
58
3
1
36
1.23
40470--40532
28
2.3
26
78
13
63
50
0
11
38
1.38
40687--40722
3
12.0
3
100
0
72
33
0
0
66
0.92
40972--41008
4
9.8
4
82
11
51
75
0
24
0
0.80
50171--50254
12
6.7
12
71
23
57
25
1
9
64
1.31
50165--50254
32
2.9
30
80
9
101
27
1
8
62
1.32
50189--50237
14
3.6
14
74
20
59
34
0
4
61
1.15
50177--50239
26
2.4
26
94
0
108
30
0
7
61
1.24
50361--50415
21
2.5
21
85
5
65
50
27
0
21
1.49
50376--50429
14
3.9
14
78
9
56
50
25
0
24
1.50
50589--50649
26
2.3
26
82
0
77
59
3
0
37
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52755--52876
39
3.1
39
89
4
192
19
34
13
31
1.91
57895--57937
19
2.2
20
83
4
52
67
0
0
32
0.91
58953--59000
20
2.4
21
77
19
57
68
4
2
25
1.18
62667--62716
20
2.5
20
93
0
82
30
46
6
18
1.73
66065--66114
3
16.7
3
79
8
57
66
0
34
0
0.92
67735--67817
41
2.0
41
95
0
148
39
16
7
36
1.77
73682--73716
16
2.1
18
89
10
56
60
34
0
5
1.21
75210--75243
8
4.1
8
85
7
50
64
0
0
35
0.94
75226--75258
10
3.2
11
91
8
52
69
0
0
30
0.88
77196--77348
84
1.8
82
82
8
193
45
1
3
49
1.29
80236--80600
181
2.0
182
97
0
696
29
23
17
29
1.97
84255--84414
80
2.0
80
100
0
320
36
18
16
28
1.93

Tables:   1

The End!