Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010388.1 Kokia drynarioides strain JFW-HI SEQ_125266, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  151991

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--352
3
14.7
3
86
4
63
31
2
0
66
1.04
5976--6282
151
2.0
151
96
0
569
35
17
16
29
1.93
12032--12280
123
2.0
123
96
1
455
29
12
18
40
1.87
12870--12899
14
2.1
14
93
0
51
26
26
3
43
1.70
16902--16940
15
2.6
15
91
0
60
30
2
30
35
1.71
17040--17069
13
2.3
13
94
0
51
50
16
0
33
1.46
17022--17176
56
2.8
56
85
0
220
43
16
9
31
1.79
19425--19507
6
14.5
6
69
14
59
43
1
2
53
1.21
19425--19504
34
2.4
34
82
4
99
42
1
2
53
1.22
19425--19504
17
4.7
18
83
10
87
42
1
2
53
1.22
32980--33864
210
4.3
210
82
4
956
36
18
21
22
1.95
34182--34228
17
2.8
17
86
0
67
42
0
4
53
1.20
34196--34241
23
2.0
22
91
4
74
41
2
4
52
1.33
35061--35100
3
13.0
3
85
15
55
65
2
0
32
1.06
36157--36389
29
8.0
28
75
10
209
34
25
2
37
1.68
36157--36391
59
4.0
57
80
10
244
34
25
2
37
1.70
36161--36373
117
1.8
118
83
9
283
35
26
2
36
1.69
36287--36500
109
2.0
108
79
7
236
37
24
3
34
1.73
39747--39782
13
3.0
13
80
19
51
44
13
0
41
1.44
43622--43647
13
2.0
13
100
0
52
0
23
0
76
0.78
45746--45843
28
3.5
28
73
9
74
25
14
23
36
1.93
50692--50735
4
11.0
4
100
0
88
50
25
0
25
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50733--50757
2
12.5
2
100
0
50
52
0
0
48
1.00
51749--51783
17
2.1
17
94
0
61
45
22
14
17
1.84
54916--54949
18
2.0
18
88
11
54
17
47
2
32
1.63
75896--76091
30
6.5
31
76
11
133
36
4
23
35
1.76
75906--76031
61
2.1
61
80
8
141
34
4
23
36
1.76
75982--76102
30
4.0
30
81
8
147
36
6
22
34
1.80
77270--77300
14
2.2
14
100
0
62
16
0
38
45
1.47
78075--78145
29
2.4
30
81
11
83
36
4
12
46
1.62
78531--78645
56
2.1
56
96
0
212
48
7
5
38
1.55
83259--83291
8
4.0
8
92
7
57
39
0
0
60
0.97
83262--83298
17
2.2
17
90
0
56
51
0
0
48
1.00
83362--83425
33
1.9
33
100
0
128
40
6
18
34
1.76
91607--91693
7
12.7
7
73
18
51
42
27
3
26
1.71
91606--91654
21
2.3
20
83
10
62
40
28
2
28
1.68
91664--91699
14
2.6
14
91
8
56
47
19
5
27
1.72
92296--92348
21
2.6
21
90
3
81
35
24
5
33
1.79
92881--92932
28
2.0
27
85
11
72
40
5
0
53
1.25
93042--93094
12
4.4
12
81
11
56
35
0
0
64
0.94
100286--100316
14
2.2
14
94
0
53
41
0
0
58
0.98
101011--101049
14
2.9
14
84
3
53
58
2
0
38
1.12
102951--102996
25
1.9
23
86
8
65
54
4
4
36
1.40
103658--104128
235
2.0
235
97
0
888
37
16
18
27
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104259--104317
21
2.8
22
85
12
79
6
11
1
79
0.99
104264--104318
20
2.8
20
81
13
60
7
12
1
78
1.04
125754--125793
21
1.9
21
85
10
55
50
0
37
12
1.41
132372--132433
24
2.6
24
97
0
115
25
12
37
24
1.91

Tables:   1

The End!