Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010407.1 Kokia drynarioides strain JFW-HI SEQ_125292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32293

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70--111
17
2.7
15
85
7
57
0
35
2
61
1.09
3701--3823
30
4.1
30
80
8
124
44
6
21
27
1.76
3707--3794
31
2.9
31
85
8
119
47
4
20
27
1.69
3707--3824
29
4.0
29
84
8
130
45
6
19
27
1.75
5480--6024
118
4.7
115
77
7
472
28
15
20
35
1.93
5480--6136
78
8.4
77
82
4
543
28
16
21
34
1.94
11224--11271
23
2.1
23
100
0
96
29
16
27
27
1.97
14494--14535
21
2.0
21
86
9
59
28
19
7
45
1.76
17802--17836
15
2.2
16
90
5
54
88
11
0
0
0.51
18067--18272
30
6.9
29
75
13
161
43
4
20
31
1.72
21064--21098
16
2.1
17
89
5
54
65
0
8
25
1.21
21758--22132
51
7.5
51
65
20
155
42
8
3
45
1.51
21676--22204
147
3.5
146
85
7
679
43
9
3
43
1.54
22613--22648
3
12.0
3
100
0
72
66
0
0
33
0.92
23130--23180
18
2.8
18
75
16
52
49
17
5
27
1.70
26731--26771
16
2.6
16
78
21
50
29
0
19
51
1.47
28114--28175
21
2.8
22
70
7
63
29
0
22
48
1.51
30019--30061
18
2.3
18
80
4
50
67
0
0
32
0.91
30215--30260
22
2.1
22
91
0
74
52
0
19
28
1.47
30188--30255
12
5.9
12
69
10
52
45
0
25
29
1.54
31290--31376
4
21.2
4
79
9
77
63
0
36
0
0.95
31290--31376
17
5.3
17
83
5
99
63
0
36
0
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31290--31376
21
4.0
21
77
13
81
63
0
36
0
0.95

Tables:   1

The End!