Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010417.1 Kokia drynarioides strain JFW-HI SEQ_125303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72434

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
376--459
3
28.0
3
74
4
62
34
4
4
55
1.42
1144--1227
6
14.7
6
79
14
97
54
1
1
42
1.15
1129--1227
17
5.7
17
85
9
96
53
1
2
43
1.19
1145--1216
23
3.1
22
86
7
99
54
1
1
43
1.17
1817--1849
8
4.0
8
96
4
57
48
0
0
51
1.00
8385--8489
33
3.2
33
65
17
90
47
3
13
35
1.61
8385--8523
67
2.1
67
97
0
260
48
2
14
33
1.58
8576--8614
18
2.3
17
86
8
53
30
10
0
58
1.31
13756--13815
23
2.6
23
73
7
59
43
20
6
30
1.77
18127--18164
6
6.3
6
100
0
76
31
15
18
34
1.92
38171--38240
26
2.6
27
71
10
63
58
4
4
32
1.37
40193--40270
20
4.1
19
73
15
63
53
6
1
38
1.35
40224--40311
44
1.9
46
86
11
128
53
2
0
44
1.13
40228--40299
18
4.0
18
68
12
58
50
1
0
48
1.09
42149--42245
21
4.7
21
73
16
78
72
16
1
10
1.17
42107--42208
12
8.8
12
72
11
70
68
16
3
10
1.33
42207--42251
23
2.0
23
86
8
65
73
20
0
6
1.05
43258--43429
23
7.5
23
78
10
156
44
20
21
13
1.85
43258--43403
69
2.1
68
85
7
188
45
19
21
13
1.85
54369--54407
3
13.0
3
94
0
69
64
0
2
33
1.08
59316--59352
3
12.3
3
94
0
65
0
62
0
37
0.96
63314--63403
46
2.0
46
93
4
155
45
13
10
31
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68858--68886
8
3.6
8
100
0
58
34
0
0
65
0.93
69598--69645
22
2.3
21
89
7
71
29
0
0
70
0.87
69870--69897
7
4.0
7
100
0
56
14
0
0
85
0.59

Tables:   1

The End!