Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010443.1 Kokia drynarioides strain JFW-HI SEQ_125334, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67938

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46--85
7
6.0
7
85
8
57
55
0
0
45
0.99
41--85
14
3.1
14
87
3
54
55
0
0
44
0.99
1202--1813
59
10.4
59
89
0
868
33
31
4
30
1.77
2052--2241
95
2.0
96
82
9
237
29
21
14
34
1.93
3966--4026
16
3.8
16
73
16
54
59
1
1
37
1.17
4576--4621
25
1.9
24
82
8
58
54
2
6
36
1.39
4773--4822
23
2.2
23
82
7
57
58
2
2
38
1.21
5371--5418
15
3.1
15
77
14
53
62
0
0
37
0.95
8896--8956
16
3.8
16
73
16
54
59
1
1
37
1.17
9506--9551
25
1.9
24
82
8
58
54
2
6
36
1.39
9703--9752
23
2.2
23
82
7
57
58
2
2
38
1.21
10301--10348
15
3.1
15
77
14
53
62
0
0
37
0.95
12559--12617
31
1.9
31
85
0
82
42
6
11
38
1.68
12701--12743
21
2.0
21
86
0
59
53
9
11
25
1.67
14468--14521
15
3.3
15
74
18
54
42
0
1
55
1.10
14701--14753
24
2.1
26
86
10
74
60
1
0
37
1.08
14702--14753
26
2.1
23
82
13
59
59
1
0
38
1.08
22090--22123
13
2.6
13
90
9
52
32
14
8
44
1.76
34809--34936
68
1.9
68
83
6
170
26
19
15
38
1.92
36225--36433
109
1.9
109
83
3
269
39
16
14
30
1.88
36857--36928
3
24.3
3
97
2
137
68
0
0
31
0.90
37017--37059
18
2.5
16
88
11
59
74
0
6
18
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38230--38429
46
4.5
46
79
9
200
23
15
27
34
1.95
38353--38941
42
14.4
41
79
8
503
25
16
28
29
1.97
38376--38941
81
7.0
80
81
6
570
25
16
27
30
1.97
40202--40244
12
3.7
12
84
6
61
2
16
0
81
0.79
41851--41906
29
1.9
29
82
13
71
55
8
23
12
1.65
42186--42240
28
2.0
28
88
0
83
30
16
27
25
1.96
43516--43546
16
1.9
16
100
0
62
12
22
12
51
1.74
47165--47380
109
2.0
109
86
0
306
42
15
10
31
1.81
47811--47881
3
23.7
3
100
0
142
67
0
0
32
0.91
47958--48000
18
2.5
16
88
11
59
74
0
6
18
1.04
48393--48422
15
1.9
16
93
6
53
70
0
13
16
1.18
48371--48412
22
2.0
22
95
4
77
69
0
11
19
1.19
48368--48427
22
2.8
20
83
14
75
68
1
13
16
1.29
49210--49286
30
2.7
29
78
9
86
62
5
0
32
1.17
56601--56673
34
2.2
33
85
7
94
52
1
1
45
1.18
58339--58398
17
3.6
17
78
10
61
66
0
0
33
0.92
58304--58395
27
3.3
30
75
15
81
64
1
0
34
1.01
59643--59817
96
1.8
96
81
4
219
36
15
20
27
1.93
60127--60520
29
13.4
27
75
15
281
30
4
29
35
1.76
60112--60520
59
7.0
58
84
4
509
30
3
30
34
1.76
63130--63202
34
2.2
33
85
7
94
52
1
1
45
1.18
64868--64927
17
3.6
17
78
10
61
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64833--64924
27
3.3
30
75
15
81
64
1
0
34
1.01
66172--66346
96
1.8
96
81
4
219
36
15
20
27
1.93
66641--67344
59
12.0
58
82
6
729
29
3
30
34
1.75
66656--67287
30
21.4
29
74
13
490
29
3
31
35
1.76

Tables:   1

The End!