Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001048.1 Kokia drynarioides strain JFW-HI SEQ_112282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54905

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1361--1408
18
2.7
18
73
0
51
18
37
25
18
1.94
2921--3298
197
1.9
198
89
0
587
28
7
21
42
1.80
8967--9000
15
2.3
15
94
0
59
14
8
26
50
1.72
9389--9575
50
3.8
50
85
1
225
34
16
28
21
1.94
9391--9574
100
1.9
98
86
2
260
34
15
28
21
1.94
9396--9573
24
7.2
24
68
5
95
34
15
29
20
1.94
18812--18842
16
1.9
16
93
0
53
54
0
22
22
1.44
20561--20615
28
2.0
28
100
0
110
32
18
27
21
1.96
37284--37394
55
2.0
55
100
0
222
40
18
23
18
1.91
46526--46610
38
2.2
37
82
14
93
25
1
4
68
1.16
48499--48524
2
13.0
2
100
0
52
50
0
0
50
1.00
50480--50530
26
2.0
26
92
0
84
27
13
9
49
1.74
54337--54400
6
11.2
6
76
15
64
43
1
3
51
1.26
54337--54432
17
5.6
16
78
17
95
43
3
3
50
1.33
54338--54403
34
1.9
34
90
6
107
40
1
3
54
1.25

Tables:   1

The End!