Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010487.1 Kokia drynarioides strain JFW-HI SEQ_125393, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96395

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73--112
2
20.0
2
100
0
80
50
0
0
50
1.00
665--691
3
9.0
3
100
0
54
33
0
0
66
0.92
2487--2548
23
2.7
23
74
2
61
40
11
14
33
1.82
4879--4943
33
2.0
32
85
8
87
56
1
1
40
1.18
6331--6395
32
2.0
32
90
0
103
35
9
20
35
1.84
7151--7218
23
2.8
24
75
4
75
17
23
2
55
1.55
7438--7479
22
1.9
22
85
0
57
47
7
2
42
1.43
13332--13387
27
2.1
26
83
9
69
35
0
3
60
1.14
13646--13702
29
1.9
30
85
3
80
33
5
7
54
1.50
16326--16424
45
2.2
45
82
5
119
20
14
22
43
1.87
16340--16425
46
1.9
45
88
4
129
19
12
24
43
1.86
17949--18028
29
2.7
29
86
7
99
32
1
8
57
1.37
22450--22571
54
2.2
56
81
7
133
41
13
3
41
1.60
23586--23610
13
1.9
13
100
0
50
0
8
0
92
0.40
30433--30463
2
15.5
2
100
0
62
51
0
0
48
1.00
33414--33461
24
2.0
24
100
0
96
54
4
8
33
1.50
38882--38912
15
2.1
15
93
0
53
83
6
9
0
0.79
39703--39755
5
10.4
5
89
6
54
32
0
5
62
1.19
39708--39755
10
4.8
10
87
5
62
31
0
6
62
1.20
39773--39820
11
4.3
11
78
2
51
43
0
0
56
0.99
39813--39862
16
3.2
16
71
23
52
50
2
6
42
1.38
40680--40778
48
2.1
48
100
0
198
35
33
15
16
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45292--45330
20
2.0
19
85
14
53
35
0
7
56
1.28
51605--51635
16
1.9
16
93
0
53
87
0
9
3
0.66
65627--65747
59
2.1
57
81
6
136
44
12
13
29
1.80
71410--71447
15
2.4
16
86
4
60
68
10
5
15
1.36
73703--73752
15
3.1
15
80
11
55
30
0
4
66
1.10
74008--74051
23
2.0
22
86
8
63
13
6
2
77
1.07
78973--79023
4
12.8
4
89
0
57
45
23
5
25
1.75
81058--81340
39
7.1
39
89
3
379
20
21
39
18
1.92
81548--81921
126
3.0
126
94
0
622
29
17
22
30
1.97
82806--82985
33
5.5
33
98
0
335
45
2
5
46
1.41
83038--83078
21
2.0
21
85
4
57
26
4
4
63
1.35
82946--83237
152
1.9
151
86
7
414
43
4
7
44
1.50
83689--83869
10
19.3
9
67
21
72
64
3
3
29
1.26
83685--83850
19
9.0
17
70
20
79
65
3
3
28
1.23
83698--83828
29
4.7
28
77
10
126
63
3
2
30
1.24
83686--83869
18
9.8
18
70
19
94
64
3
3
29
1.25
83759--83869
38
2.9
38
76
11
104
64
1
2
30
1.17
83784--83833
21
2.4
21
82
0
64
62
2
2
34
1.18
83759--83873
48
2.4
48
80
11
139
63
1
2
32
1.18
83708--83850
57
2.5
55
86
10
191
64
3
2
30
1.22
84097--84148
18
2.8
18
94
2
86
46
0
0
53
1.00
84097--84159
18
3.5
17
89
6
72
44
1
0
53
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84144--84190
16
3.1
15
79
8
51
19
6
0
74
1.03
84139--84190
14
3.6
14
77
10
50
23
5
0
71
1.07
84212--84400
90
2.1
91
86
3
258
33
6
14
45
1.71
84843--84882
21
1.9
21
89
0
62
30
25
7
37
1.83
86261--86309
2
24.5
2
100
0
98
51
0
0
48
1.00
88019--88104
36
2.4
36
92
0
136
38
20
8
32
1.82
88089--88121
17
1.9
17
93
0
57
45
21
15
18
1.85

Tables:   1

The End!