Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010492.1 Kokia drynarioides strain JFW-HI SEQ_125400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36134

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
597--650
20
2.7
20
81
16
67
44
18
3
33
1.67
1312--1644
49
6.8
49
72
7
192
20
23
16
39
1.92
1458--1765
146
2.1
147
80
3
343
19
24
17
38
1.93
6090--6118
15
1.9
15
100
0
58
62
13
10
13
1.55
6834--6871
4
9.2
4
88
5
58
71
0
0
28
0.87
8201--8269
34
2.1
34
97
2
131
47
24
2
24
1.65
8808--9341
49
10.9
49
72
5
249
18
22
18
40
1.92
8987--9259
98
2.8
98
79
3
291
19
22
17
39
1.92
8972--9339
98
3.8
97
75
4
290
17
22
18
40
1.91
10399--10495
50
2.0
49
89
2
149
18
22
15
43
1.88
15816--15857
13
3.1
13
86
10
57
61
11
11
14
1.56
16972--17003
15
2.0
17
88
11
50
68
6
0
25
1.12
17691--17752
33
1.9
32
90
6
99
51
17
1
29
1.55
22693--22721
14
2.1
14
100
0
58
24
20
27
27
1.99
27503--27736
52
4.6
52
81
7
280
37
23
12
26
1.90
27503--27736
101
2.3
103
86
3
321
37
23
12
26
1.90
32121--32197
21
3.9
21
70
19
74
36
25
12
24
1.92
32127--32202
38
2.0
38
100
0
152
36
26
13
23
1.91
32142--32207
21
3.3
21
63
16
59
34
25
10
28
1.89
32948--33181
101
2.3
103
87
2
337
37
24
12
25
1.91
32948--33181
52
4.6
52
86
3
321
37
24
12
25
1.91

Tables:   1

The End!