Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010516.1 Kokia drynarioides strain JFW-HI SEQ_125428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79125

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1101--1199
6
17.2
6
72
12
82
56
2
1
40
1.17
1098--1199
17
5.6
17
72
21
66
56
1
0
40
1.17
1105--1199
29
3.3
27
80
11
102
56
2
1
40
1.18
1134--1189
23
2.4
23
84
0
76
57
3
0
39
1.16
1140--1183
11
3.9
11
85
5
52
59
4
0
36
1.18
1121--1219
29
3.4
29
82
8
130
58
4
0
37
1.17
1467--1496
14
2.1
14
100
0
60
20
26
20
33
1.97
1770--1842
37
2.0
37
83
0
92
27
20
16
35
1.94
1637--2071
207
2.1
210
82
4
524
22
22
17
37
1.94
2173--3485
209
6.3
209
82
3
1348
23
22
17
36
1.94
1549--2658
587
1.9
581
89
1
1472
22
21
17
38
1.94
2219--3452
413
3.0
410
81
5
1332
23
22
17
37
1.94
8450--8480
16
1.9
16
93
0
53
0
29
6
64
1.18
8985--9070
36
2.4
36
98
0
163
48
20
8
22
1.75
17086--18098
49
20.7
49
69
10
410
37
17
25
19
1.93
17098--18096
98
10.2
98
86
0
1113
37
17
25
19
1.93
18392--18614
78
2.9
77
81
2
268
23
29
20
26
1.99
18378--18613
39
6.1
39
70
8
140
24
30
19
25
1.98
19188--19240
24
2.2
24
77
12
56
37
3
1
56
1.28
22819--22870
21
2.5
21
84
6
70
30
28
13
26
1.94
30254--30279
12
2.2
12
100
0
52
34
7
15
42
1.75
38092--38123
14
2.4
13
94
5
55
62
0
0
37
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39381--39438
28
2.2
26
79
14
64
44
0
3
51
1.18
39437--39481
22
2.0
23
86
8
65
46
4
6
42
1.50
40633--40667
17
2.1
16
89
5
52
71
14
2
11
1.25
40103--40753
327
2.0
326
95
0
1178
59
14
3
22
1.50
40690--40741
23
2.3
22
80
3
59
67
21
3
7
1.32
48334--48473
70
2.0
70
98
0
271
35
20
17
25
1.95
64210--64357
60
2.5
60
77
2
163
43
15
4
36
1.66
64646--64694
16
3.1
16
82
5
55
51
4
0
44
1.20
65846--65899
20
2.7
20
85
0
63
27
31
11
29
1.91
66086--66140
20
2.8
20
85
0
56
32
25
9
32
1.87
68073--68155
19
4.4
19
78
6
78
27
24
25
22
2.00
68073--68162
38
2.4
38
79
3
101
28
23
24
23
1.99
76094--76190
46
2.2
43
85
7
122
56
14
18
10
1.66
77002--77154
49
3.1
49
80
2
146
38
18
25
17
1.92
77946--77985
17
2.4
17
86
0
53
45
2
0
52
1.14

Tables:   1

The End!