Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010517.1 Kokia drynarioides strain JFW-HI SEQ_125429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  220654

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
312--397
4
21.2
4
75
11
68
1
34
0
63
1.02
312--391
17
4.6
17
79
14
76
1
35
0
63
1.02
314--398
13
7.0
12
71
11
57
1
35
0
63
1.02
312--398
20
4.5
19
79
12
106
1
35
0
63
1.02
1031--1084
26
2.1
25
83
13
65
44
9
1
44
1.46
16692--16727
2
18.0
2
100
0
72
50
0
0
50
1.00
21238--21277
2
20.0
2
100
0
80
0
0
50
50
1.00
34769--34800
17
1.9
16
93
6
55
21
0
3
75
0.95
49507--49556
27
2.0
26
88
11
77
32
12
30
26
1.92
49793--49827
11
3.1
11
87
4
52
62
2
0
34
1.10
67212--67267
26
2.2
26
84
12
71
35
0
10
53
1.36
67221--67273
26
2.1
24
82
6
61
37
1
7
52
1.41
74053--74162
55
2.0
54
85
7
150
33
2
20
42
1.67
91528--91552
2
12.5
2
100
0
50
48
0
0
52
1.00
91655--91689
3
11.7
3
93
0
61
2
0
68
28
1.04
98106--98132
1
27.0
1
100
0
54
0
0
0
100
0.00
106222--106250
11
2.6
11
100
0
58
20
0
27
51
1.47
109246--109274
6
4.8
6
100
0
58
0
31
17
51
1.45
118721--118774
28
1.9
27
82
14
65
50
0
3
46
1.19
120661--120708
14
3.5
14
83
11
55
37
2
0
60
1.09
120930--120993
20
3.4
19
68
16
53
50
4
3
42
1.39
120919--120991
36
2.0
36
91
0
119
45
5
4
45
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124075--124132
30
1.9
31
89
3
91
46
10
6
36
1.65
124926--124964
4
9.5
4
83
5
51
69
2
5
23
1.21
133104--133456
176
2.0
176
100
0
706
36
13
16
33
1.87
142366--142517
59
2.6
59
81
5
173
30
11
13
44
1.80
142366--142583
59
3.7
58
79
3
166
30
14
14
41
1.85
154090--154148
31
1.9
31
82
0
73
35
6
10
47
1.64
168978--169035
29
2.0
29
83
6
73
36
1
8
53
1.42
169699--169767
31
2.3
31
85
12
90
47
18
13
20
1.81
170683--170753
31
2.3
31
83
11
94
22
14
18
45
1.85
178580--178638
15
3.8
15
75
16
57
71
16
5
6
1.26
178553--178677
21
5.7
21
76
13
101
68
18
4
8
1.32
178594--178677
44
1.9
44
82
4
107
70
17
5
5
1.29
178569--178677
23
4.8
24
77
10
111
68
18
5
7
1.33
179958--179998
13
2.9
15
79
20
52
58
0
0
41
0.98
180031--180087
15
3.5
15
71
17
51
49
1
1
47
1.22
191302--191336
16
2.2
16
90
10
54
31
17
0
51
1.45
196821--196917
23
4.2
23
88
2
133
11
25
22
40
1.87
201270--201294
5
5.0
5
100
0
50
20
0
80
0
0.72
203593--203924
164
2.0
163
95
0
592
28
18
14
38
1.90
206650--206844
98
2.0
97
95
1
354
44
9
15
29
1.79
209629--209655
7
3.9
7
100
0
54
29
29
11
29
1.91
210999--211059
31
2.0
31
83
6
79
34
3
13
49
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
215531--215578
21
2.2
22
88
7
71
4
8
18
68
1.31
219245--219526
141
2.0
141
99
0
555
28
14
22
34
1.94
220285--220324
20
2.0
20
90
4
64
32
2
0
65
1.06
220288--220331
19
2.2
20
84
4
54
34
2
0
63
1.07
220287--220331
20
2.2
20
84
7
56
33
2
0
64
1.06

Tables:   1

The End!