Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010565.1 Kokia drynarioides strain JFW-HI SEQ_125487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48847

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1090--1162
20
3.6
20
73
14
60
61
4
1
32
1.23
1508--1550
14
3.1
15
83
9
56
20
4
4
69
1.25
2544--2581
19
2.0
19
94
0
67
28
15
34
21
1.94
14415--14458
17
2.6
17
85
0
61
15
9
11
63
1.51
14415--14468
17
3.2
16
84
12
56
16
9
11
62
1.52
18310--18349
20
2.1
19
85
4
53
67
2
0
30
1.04
21572--21605
17
2.1
16
94
5
59
55
5
2
35
1.39
22108--22219
57
1.9
59
83
3
147
54
7
6
32
1.53
22578--22732
72
2.2
70
82
10
197
38
0
32
27
1.62
36902--36955
26
2.1
26
96
0
99
31
14
16
37
1.89
37014--37054
18
2.3
19
80
20
52
34
2
24
39
1.69
39516--39583
30
2.3
30
82
5
84
51
0
0
48
1.00
39557--39623
24
2.9
24
76
6
68
43
4
2
49
1.38
42004--42041
18
2.1
19
85
5
51
63
10
2
23
1.39
48090--48300
30
7.2
30
74
9
159
39
2
22
36
1.67
48088--48172
28
3.0
28
83
10
109
41
1
20
37
1.60
48092--48300
59
3.5
58
79
4
213
38
2
22
36
1.67

Tables:   1

The End!