Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010574.1 Kokia drynarioides strain JFW-HI SEQ_125497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11997

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
783--837
18
3.0
18
84
7
67
65
5
12
16
1.43
806--874
27
2.5
26
80
13
77
72
2
10
14
1.22
806--909
28
3.8
28
75
24
89
70
3
11
14
1.30
858--907
25
1.9
27
84
15
70
72
4
12
12
1.26
3364--3396
17
1.9
17
88
11
50
27
0
6
66
1.15
3590--3713
50
2.4
51
81
5
135
37
17
10
34
1.84
4706--4760
18
3.0
18
84
7
67
65
5
12
16
1.43
4729--4797
27
2.5
26
80
13
77
72
2
10
14
1.22
4729--4832
28
3.8
28
75
24
89
70
3
11
14
1.30
4781--4830
25
1.9
27
84
15
70
72
4
12
12
1.26
7287--7319
17
1.9
17
88
11
50
27
0
6
66
1.15
7513--7636
50
2.4
51
81
5
135
37
17
10
34
1.84
8857--8911
18
3.0
18
84
7
67
65
5
12
16
1.43
8880--8948
27
2.5
26
80
13
77
72
2
10
14
1.22
8880--8983
28
3.8
28
75
24
89
70
3
11
14
1.30
8932--8981
25
1.9
27
84
15
70
72
4
12
12
1.26
11438--11470
17
1.9
17
88
11
50
27
0
6
66
1.15
11664--11787
50
2.4
51
81
5
135
37
17
10
34
1.84

Tables:   1

The End!