Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010581.1 Kokia drynarioides strain JFW-HI SEQ_125506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90814

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4017--4068
20
2.7
20
76
8
54
61
7
0
30
1.24
27200--27357
72
2.1
76
89
6
243
25
22
20
31
1.98
27293--27350
30
1.9
30
92
0
98
27
20
22
29
1.99
27200--27372
24
7.0
24
82
8
195
26
21
19
32
1.97
27200--27372
78
2.3
72
87
5
238
26
21
19
32
1.97
30581--30634
18
3.0
18
89
5
83
27
0
7
64
1.20
31535--31781
25
10.3
25
83
9
293
37
23
26
12
1.90
31535--31790
47
5.4
47
82
10
283
38
23
26
12
1.90
35676--35709
9
3.8
9
84
0
50
85
2
11
0
0.71
39336--39398
27
2.3
27
86
0
90
22
14
23
39
1.91
39392--39548
24
6.5
24
89
0
233
27
24
21
27
1.99
44146--44205
27
2.2
27
87
0
84
28
16
20
35
1.94
44208--44336
24
5.4
24
94
0
213
22
21
26
29
1.99
45304--45414
49
2.2
50
82
4
136
29
16
34
19
1.94
45537--45744
41
5.0
41
85
4
285
31
20
20
27
1.97
46095--46259
85
1.9
85
82
2
206
39
15
20
25
1.91
45794--46377
208
2.8
206
84
4
746
40
16
19
23
1.90
46472--46861
123
3.2
122
83
2
476
38
15
20
25
1.92
48854--48904
18
2.8
18
87
3
75
27
0
5
66
1.14
50475--50522
24
2.0
23
84
11
62
18
20
8
52
1.71
52724--52780
29
1.9
30
96
3
107
31
15
28
24
1.96
56836--56864
14
2.1
14
100
0
58
17
13
6
62
1.52
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57642--57674
16
2.1
16
100
0
66
51
24
0
24
1.48
63579--63714
50
2.7
50
93
1
227
28
5
11
53
1.60
65844--65869
11
2.4
11
100
0
52
7
0
0
92
0.39
66184--66258
4
18.5
4
86
8
80
66
0
33
0
0.92
66184--66258
17
4.6
16
77
6
80
66
0
33
0
0.92
70203--70255
14
3.8
14
78
9
54
20
3
24
50
1.64
70204--70260
28
2.0
28
93
0
96
21
3
24
50
1.64
70206--70277
28
2.6
28
86
4
92
22
4
26
47
1.69
70535--70671
45
3.0
45
84
4
177
18
20
26
34
1.96
72495--72589
30
3.2
29
70
8
93
45
11
5
37
1.63
72622--72671
16
3.2
16
73
21
61
36
0
4
60
1.16
72851--72883
11
3.1
11
86
8
50
33
0
0
66
0.92
73346--73370
12
2.1
12
100
0
50
52
0
0
48
1.00
73543--73591
9
5.8
9
74
13
50
2
40
0
57
1.10
73543--73592
24
2.1
24
92
0
82
2
40
0
58
1.10
73588--73626
17
2.4
17
86
4
53
5
17
0
76
0.96
75077--75119
19
2.2
20
87
4
61
27
4
0
67
1.10
81040--81079
18
2.3
18
86
4
55
55
12
15
17
1.70
83407--83435
14
2.0
15
93
6
51
68
0
10
20
1.18

Tables:   1

The End!