Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010605.1 Kokia drynarioides strain JFW-HI SEQ_125537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18565

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
337--387
3
17.3
3
77
4
50
56
3
1
37
1.29
1462--1570
30
3.6
30
88
2
155
31
33
2
33
1.72
11550--11784
117
2.0
117
94
0
407
22
27
5
43
1.75
12060--12085
6
4.3
6
100
0
52
50
15
0
34
1.45
12655--12685
4
7.5
4
96
3
53
3
22
0
74
0.96
12868--12897
3
10.0
3
92
0
51
63
0
36
0
0.95
13234--13258
13
1.9
13
100
0
50
40
4
8
48
1.51
13542--13605
20
3.3
20
70
16
71
40
10
9
39
1.73
13535--13593
19
3.1
19
68
18
59
42
10
10
37
1.73
13537--13601
22
3.2
22
64
31
63
44
9
9
36
1.68
14464--14655
96
2.0
96
83
8
239
34
13
22
30
1.92
14861--14923
30
2.1
30
82
5
74
31
12
25
30
1.93
14877--14935
29
2.0
29
87
6
84
28
11
28
30
1.92
14950--15392
59
7.6
57
76
9
272
35
4
27
33
1.77
14979--15089
30
3.8
26
76
15
87
36
4
25
34
1.76
14979--15416
29
14.9
28
71
13
188
35
3
26
34
1.74
14987--15403
58
7.1
59
79
4
263
35
3
26
34
1.74
17172--17216
12
3.9
11
80
8
54
60
2
2
35
1.22
17152--17252
18
5.4
18
74
12
87
52
1
1
43
1.23
17171--17216
23
2.0
24
91
4
76
58
2
2
36
1.22
17615--18301
200
3.4
200
92
0
1092
21
23
19
36
1.95

Tables:   1

The End!