Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010611.1 Kokia drynarioides strain JFW-HI SEQ_125544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95356

Tables:   1   

This is table  1  of  1  ( 62 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1271--1800
205
2.6
200
86
1
700
35
19
22
22
1.96
1679--1749
37
1.9
37
82
0
88
39
22
21
16
1.92
2125--2244
34
3.7
34
75
16
101
42
2
2
52
1.28
2125--2244
6
21.0
6
69
14
67
42
2
2
52
1.28
2125--2245
17
7.4
17
74
13
85
42
2
2
52
1.28
2951--3012
3
20.3
3
83
9
63
58
0
1
40
1.08
4018--4198
30
6.1
31
83
10
218
35
24
4
34
1.77
4018--4236
59
3.7
61
83
8
247
34
24
4
36
1.76
4018--4236
30
7.3
29
80
5
208
34
24
4
36
1.76
4018--4236
89
2.4
87
78
8
235
34
24
4
36
1.76
6568--7031
117
4.0
116
73
9
359
26
17
29
25
1.98
6726--6869
39
3.7
39
68
3
110
28
19
28
23
1.98
6532--7455
78
11.9
78
76
2
521
26
17
29
25
1.98
6860--7376
117
4.4
115
78
2
372
26
16
30
26
1.97
7037--7455
117
3.6
116
77
4
385
26
17
30
26
1.97
16321--16604
30
9.5
30
76
12
212
34
3
21
40
1.71
16321--16602
90
3.2
88
79
7
295
34
3
21
40
1.71
16523--16579
29
1.9
30
86
10
82
35
3
21
40
1.70
17425--17455
3
10.3
3
100
0
62
67
0
0
32
0.91
17578--17616
11
3.5
11
89
6
53
12
0
7
79
0.93
17586--17616
11
2.7
12
90
10
55
16
0
6
77
0.97
22223--22680
59
7.8
59
83
5
552
50
6
8
34
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22752--22814
33
1.9
33
83
0
81
7
12
41
38
1.73
23666--23716
24
2.1
25
81
3
59
50
7
5
35
1.55
24652--24693
21
2.0
22
90
4
68
71
0
4
23
1.05
25390--25433
18
2.5
17
85
7
61
68
0
2
29
1.02
25356--25517
19
8.5
18
71
13
76
67
0
6
25
1.15
25370--25585
19
11.7
18
69
19
74
66
0
5
27
1.20
25485--25538
19
2.9
18
91
5
81
70
1
7
20
1.21
25883--25929
19
2.5
19
83
16
62
38
2
0
59
1.09
25983--26041
20
3.0
19
82
5
55
37
0
1
61
1.07
26016--26083
35
1.9
35
85
5
93
32
4
1
61
1.24
26070--26120
26
1.9
27
84
11
70
25
9
3
60
1.45
36849--36885
17
2.2
17
90
9
58
67
10
16
5
1.38
37209--37244
18
2.0
18
89
10
56
61
0
2
36
1.11
42480--42543
24
2.7
24
87
0
74
21
28
17
32
1.96
47832--47878
21
2.2
21
88
0
67
23
12
29
34
1.92
49023--49081
19
2.9
19
76
16
57
57
5
3
33
1.37
49036--49114
10
7.8
10
73
8
61
62
3
2
31
1.27
49070--49143
32
2.4
30
84
8
87
59
2
2
35
1.26
49664--49810
48
3.3
47
68
27
133
35
2
4
58
1.29
49651--49814
85
1.9
85
93
2
285
34
1
4
59
1.28
49659--49850
9
21.0
9
68
21
75
34
1
3
60
1.22
49651--49834
85
2.2
83
88
6
268
34
1
3
59
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52006--52055
21
2.4
21
79
0
55
58
10
4
28
1.49
53441--53490
25
2.0
25
85
14
68
38
12
12
38
1.80
58930--59004
21
3.6
21
73
10
73
28
26
14
30
1.95
61728--61761
16
2.1
16
88
0
50
29
14
14
41
1.86
66635--66706
30
2.5
28
76
12
74
37
15
6
40
1.74
66637--66696
30
2.0
30
87
6
86
36
15
5
43
1.68
66786--66857
23
3.3
22
75
11
76
59
12
0
27
1.33
66803--66869
20
3.2
19
75
19
62
65
11
0
22
1.25
66803--66874
19
3.5
20
75
18
76
63
12
0
23
1.28
74791--74821
12
2.6
12
94
0
53
29
16
48
6
1.70
75644--75709
31
2.1
31
85
0
87
42
10
15
31
1.81
78628--78665
20
1.9
20
94
0
67
55
2
13
28
1.51
78988--79120
58
2.3
58
82
0
167
48
16
2
32
1.58
79926--79987
20
3.3
19
82
6
81
16
9
17
56
1.66
83196--83261
31
2.1
32
86
5
91
53
4
4
37
1.42
85953--85988
13
2.8
13
91
0
54
63
2
2
30
1.22
93754--93819
33
2.0
33
94
2
116
25
19
28
25
1.99
94234--94332
47
2.1
47
83
5
121
21
17
16
45
1.85

Tables:   1

The End!