Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010650.1 Kokia drynarioides strain JFW-HI SEQ_125593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43789

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63--341
30
9.4
28
77
6
153
35
21
2
39
1.69
60--353
60
5.0
58
73
8
245
35
22
3
39
1.69
117--351
89
2.6
90
84
5
273
35
22
2
38
1.70
6583--6717
70
1.9
71
84
6
184
40
10
17
31
1.84
12732--12821
4
22.5
4
76
13
60
64
0
34
1
1.01
12737--12773
13
2.8
13
100
0
74
75
0
24
0
0.80
12732--12808
17
4.5
17
76
9
66
66
0
32
1
1.00
16210--16346
45
3.0
45
86
0
202
21
18
26
33
1.96
18272--18321
16
3.2
16
73
21
61
32
0
8
60
1.26
18977--19019
21
2.1
20
86
4
59
55
13
0
30
1.39
19093--19170
23
3.3
22
71
20
59
66
7
0
25
1.18
19391--19428
11
3.4
11
96
3
67
0
13
0
86
0.56
20087--20137
25
2.1
23
82
7
57
49
5
0
45
1.26
24254--24291
18
2.1
18
100
0
76
21
10
15
52
1.72
26786--26824
6
6.5
6
87
0
51
23
30
0
46
1.53
30412--30438
9
3.0
9
100
0
54
66
0
0
33
0.92
30826--30876
26
1.9
27
84
11
70
64
3
0
31
1.11
30841--30885
23
2.0
22
82
4
54
68
2
0
28
1.01
32505--32531
14
1.9
14
100
0
54
22
7
3
66
1.33
34635--34669
13
2.6
14
90
4
54
2
11
0
85
0.69
41345--41421
31
2.5
31
82
0
91
25
15
12
45
1.82
41626--41729
30
3.5
29
77
13
122
46
12
14
26
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41629--41798
59
2.9
57
83
9
193
55
11
9
23
1.65
41721--41813
29
3.3
28
77
10
91
62
10
1
25
1.35

Tables:   1

The End!