Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010654.1 Kokia drynarioides strain JFW-HI SEQ_125597, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102545

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
402--445
4
11.0
4
85
9
63
2
22
0
75
0.92
1467--2046
30
19.8
28
71
13
162
34
25
3
37
1.72
1501--2067
29
19.3
29
74
8
301
34
25
2
37
1.72
1502--2046
58
9.3
58
74
7
334
33
25
3
37
1.72
2025--2098
30
2.5
28
80
18
80
43
21
1
33
1.61
2053--2128
30
2.5
30
84
4
89
42
19
3
34
1.70
6358--6410
6
8.8
6
95
0
97
33
16
33
15
1.90
6710--6745
3
12.0
3
100
0
72
33
0
0
66
0.92
7012--7046
17
2.1
16
89
5
52
62
0
0
37
0.95
8147--8221
38
2.0
38
94
0
132
48
5
37
9
1.58
15525--15559
5
7.0
5
90
0
52
0
62
2
34
1.10
18965--19136
83
2.0
83
91
8
272
34
11
11
42
1.78
27060--27500
217
2.0
218
98
0
848
29
10
26
33
1.90
29373--29564
24
8.0
24
84
1
231
21
21
14
42
1.88
29373--29564
97
2.0
96
84
1
249
21
21
14
42
1.88
41090--41132
18
2.4
18
80
7
52
74
9
0
16
1.06
46494--46518
6
4.2
6
100
0
50
16
0
0
84
0.63
48349--48389
19
2.1
20
82
13
50
26
12
4
56
1.56
49414--49471
16
3.7
15
80
11
71
44
6
0
48
1.29
51513--51559
2
23.5
2
100
0
94
51
0
48
0
1.00
60720--60748
2
14.5
2
100
0
58
51
0
0
48
1.00
65107--65152
23
2.0
23
100
0
92
34
17
21
26
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72305--72350
22
2.1
21
84
11
58
19
0
23
56
1.42
73543--73611
21
3.3
21
77
0
66
27
14
26
31
1.95
75866--75898
15
2.4
14
90
10
50
18
0
30
51
1.46
83101--83210
54
2.0
54
100
0
220
42
12
9
35
1.75
90398--90472
28
2.7
29
76
15
86
6
18
26
48
1.73
94675--94773
47
2.1
47
96
0
180
52
3
13
31
1.55
96009--96040
3
10.7
3
100
0
64
65
0
34
0
0.93
102506--102545
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!