Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010658.1 Kokia drynarioides strain JFW-HI SEQ_125601, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85195

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501--1043
29
18.5
29
72
17
322
31
4
29
34
1.78
502--1043
59
9.2
59
88
2
718
31
4
29
34
1.78
502--1043
117
4.6
117
85
5
704
31
4
29
34
1.78
2064--2100
19
1.9
19
94
0
65
35
2
0
62
1.10
2086--2124
21
1.9
20
89
5
60
53
0
0
46
1.00
2062--2101
3
13.0
3
89
5
62
35
2
0
62
1.09
2918--2958
11
3.9
11
78
21
52
58
0
2
39
1.11
2898--2958
19
3.4
17
80
10
68
52
0
3
44
1.17
2913--2958
19
2.4
19
92
0
74
56
0
2
41
1.11
20509--20544
16
2.3
16
90
4
56
33
0
2
63
1.08
21123--21180
26
2.2
26
79
14
66
63
0
0
36
0.94
21143--21204
27
2.3
27
83
10
83
58
0
0
41
0.98
21145--21208
26
2.5
27
87
7
89
57
0
0
42
0.98
22510--22597
24
3.8
22
74
18
63
38
1
0
60
1.04
22530--22576
24
2.0
24
87
8
69
38
0
0
61
0.96
23373--23409
19
1.9
19
89
10
58
43
0
5
51
1.24
30102--30139
6
6.3
6
93
0
67
50
0
0
50
1.00
33125--33248
51
2.4
52
81
6
144
37
8
20
33
1.83
39637--39673
19
1.9
19
88
0
56
21
8
5
64
1.40
40053--40090
12
3.1
12
82
17
51
73
0
13
13
1.09
45484--45539
29
2.0
28
85
3
76
62
7
1
28
1.32
45646--45686
17
2.3
17
87
8
55
75
0
4
19
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45703--45853
9
16.0
9
69
19
85
29
5
1
62
1.28
45708--45854
10
15.4
10
68
16
80
28
4
2
64
1.25
45708--45826
19
5.8
19
68
27
75
30
4
2
63
1.27
45709--45814
28
3.7
27
79
8
95
30
4
2
62
1.30
45708--45852
29
5.1
27
72
17
100
28
4
2
64
1.26
45775--45834
19
3.2
18
86
13
86
28
0
1
70
0.97
45775--45853
19
4.2
18
79
10
79
26
2
1
69
1.09
48162--48190
2
14.5
2
100
0
58
48
0
0
51
1.00
48324--48372
26
2.0
25
84
8
64
38
0
4
57
1.18
48419--48467
16
3.2
16
72
18
50
55
0
0
44
0.99
68494--68546
22
2.4
22
75
6
54
37
1
5
54
1.35
68494--68549
21
2.5
23
80
8
71
39
1
5
53
1.34
69487--69516
10
2.9
10
95
5
51
73
0
6
20
1.05
75767--75871
52
2.0
52
96
0
192
42
5
11
40
1.65

Tables:   1

The End!