Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010676.1 Kokia drynarioides strain JFW-HI SEQ_125622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  121402

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14115--14144
12
2.5
12
88
0
51
56
16
26
0
1.40
16919--16958
8
5.5
8
77
22
52
55
0
0
45
0.99
16918--16961
20
2.2
20
100
0
88
56
0
0
43
0.99
30966--31173
9
21.4
9
68
22
61
60
2
1
35
1.23
31015--31226
10
21.1
10
67
16
57
59
3
2
34
1.27
31023--31105
29
2.9
26
80
18
85
59
1
1
38
1.13
31484--31522
19
2.1
19
100
0
78
28
10
0
61
1.28
36523--36607
43
2.0
43
86
4
118
21
15
32
30
1.94
37047--37148
40
2.5
40
83
0
132
37
21
17
23
1.94
37213--37294
29
2.8
30
75
5
87
24
19
17
39
1.92
37275--37338
29
2.2
29
82
0
74
26
20
17
35
1.94
37291--37376
17
5.6
17
64
25
57
25
15
19
39
1.91
37288--37388
29
3.5
29
84
2
132
25
14
19
39
1.90
38236--38320
27
3.0
27
71
11
73
47
1
4
47
1.31
40629--40672
23
1.9
24
86
9
65
36
2
2
59
1.23
41743--41780
19
2.0
20
84
5
51
52
0
7
39
1.31
48065--48142
31
2.6
29
80
8
84
42
10
5
42
1.61
53749--53791
17
2.6
17
75
17
54
30
0
6
62
1.21
61664--62696
130
7.7
130
85
8
1221
32
16
21
30
1.95
61484--62685
260
4.5
265
83
9
1262
32
15
20
31
1.94
61478--62711
130
9.2
133
81
11
731
32
14
20
32
1.93
69320--69352
2
16.5
2
93
0
57
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71013--71065
24
2.2
24
96
0
97
33
5
16
43
1.72
71093--71153
31
1.9
33
83
12
83
26
0
1
72
0.94
83878--83923
23
2.0
23
87
8
67
47
10
10
30
1.73
86002--86035
17
2.0
17
88
0
50
44
8
8
38
1.67
86009--86194
87
2.1
87
100
0
372
32
9
18
39
1.84
86239--86306
6
11.3
6
93
0
100
1
48
0
50
1.10
86602--86705
6
17.3
6
93
0
136
1
45
0
52
1.11
87927--88119
96
2.0
96
82
8
232
39
11
19
30
1.86
88471--88725
29
8.6
29
78
12
245
34
3
25
35
1.74
88447--88737
59
4.9
60
83
8
303
35
4
24
35
1.77
90377--90416
17
2.4
16
88
12
55
47
5
5
42
1.47
91091--91167
30
2.6
30
87
0
109
27
22
23
27
1.99
110756--110791
19
1.9
19
88
5
56
61
0
0
38
0.96
110753--110810
29
2.0
28
83
6
71
60
1
5
32
1.29
119997--120037
20
2.2
18
86
8
55
21
0
29
48
1.50
120019--120112
40
2.3
41
82
10
113
21
6
31
40
1.78

Tables:   1

The End!