Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010681.1 Kokia drynarioides strain JFW-HI SEQ_125627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65821

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2943--3030
44
2.0
44
95
0
158
54
7
12
25
1.64
4259--4321
29
2.2
30
78
18
71
41
7
19
31
1.80
4266--4330
29
2.2
30
78
8
71
40
9
16
33
1.81
5593--5630
19
2.0
19
85
10
51
5
0
18
76
0.97
5947--6532
96
5.9
96
75
10
489
24
25
16
33
1.95
6140--6357
114
1.9
114
85
1
303
23
24
15
36
1.93
6044--6453
210
2.0
210
85
1
554
24
25
15
34
1.95
5948--6547
306
2.0
306
88
2
891
23
25
16
34
1.95
6803--7386
49
11.9
49
70
8
283
18
29
15
36
1.92
6796--7333
99
5.5
100
81
3
569
18
28
15
36
1.92
7808--8020
112
1.9
114
84
5
290
36
12
20
30
1.90
8328--8414
25
3.5
24
76
22
81
0
20
0
79
0.74
8329--8410
17
4.6
17
76
13
76
0
20
0
79
0.74
8343--8392
15
3.5
15
82
15
54
0
20
0
80
0.72
8328--8414
39
2.3
38
81
15
99
0
20
0
79
0.74
8331--8387
10
6.2
10
75
22
54
0
21
0
78
0.74
8341--8395
7
7.7
7
75
17
51
0
20
0
80
0.72
8330--8388
11
5.3
11
78
11
66
0
20
0
79
0.73
8344--8414
33
2.2
31
80
11
81
0
18
0
81
0.69
10899--10935
18
2.1
18
90
10
58
37
21
27
13
1.91
12220--12290
30
2.4
30
90
2
108
43
1
21
33
1.61
12220--12304
29
2.9
30
87
3
111
43
2
21
32
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12252--12314
29
2.1
30
82
8
76
34
4
20
39
1.74
12918--13194
132
2.1
132
92
1
468
28
18
17
36
1.93
19460--19513
22
2.5
22
82
11
58
44
0
14
40
1.46
19531--19567
18
2.1
18
89
0
56
48
0
27
24
1.51
26837--26873
18
2.1
18
89
0
56
48
0
27
24
1.51
29014--29071
21
2.8
21
84
5
82
31
20
13
34
1.92
29131--29177
21
2.2
21
96
0
85
44
17
14
23
1.85
29739--29908
61
2.8
61
86
1
227
27
23
15
34
1.95
29923--30052
51
2.5
51
87
1
170
26
23
15
34
1.94
35621--35667
3
15.7
3
100
0
94
65
0
34
0
0.93
48430--48479
21
2.3
22
79
3
57
54
4
0
42
1.19
52544--52582
15
2.5
16
88
12
55
28
2
0
69
1.02
57680--57785
40
2.7
40
83
0
113
38
23
10
27
1.87
57714--57816
40
2.6
40
88
0
152
35
19
15
29
1.93
57714--57846
40
3.3
40
82
1
142
36
18
15
30
1.92
60744--60822
37
2.0
40
81
13
94
41
0
2
55
1.13
61385--61432
24
2.0
24
100
0
96
20
16
12
50
1.78
63528--63569
21
2.0
21
90
4
66
7
26
4
61
1.42

Tables:   1

The End!