Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010689.1 Kokia drynarioides strain JFW-HI SEQ_125635, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49756

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--149
4
8.5
4
87
6
52
0
22
0
77
0.78
96--149
22
2.5
22
82
11
58
1
25
1
70
1.07
13903--13932
3
10.0
3
92
0
51
3
30
33
33
1.74
13904--13934
15
2.1
15
100
0
62
6
25
32
35
1.82
13972--14009
11
3.5
11
82
7
51
10
23
0
65
1.23
13965--14009
21
2.1
22
87
4
65
8
26
0
64
1.23
18529--18611
37
2.4
34
80
13
96
71
6
2
20
1.19
19749--19796
19
2.5
20
80
16
57
37
0
4
58
1.18
19757--19796
18
2.2
18
86
8
55
37
0
2
60
1.11
20944--20969
9
2.9
9
100
0
52
65
11
0
23
1.25
22823--22902
25
3.2
25
83
5
99
35
25
18
21
1.96
26389--26474
40
2.2
40
100
0
172
29
12
15
43
1.83
29644--29673
15
1.9
16
93
6
53
16
6
10
66
1.41
33150--33261
57
2.0
57
82
7
138
31
9
11
47
1.72
38981--39008
13
2.2
13
100
0
56
35
0
14
50
1.43
40188--40246
14
4.4
13
74
19
50
23
1
1
72
1.02
43122--43198
30
2.6
28
82
13
84
14
9
2
74
1.17
43153--43186
17
2.1
17
94
5
61
11
11
0
76
1.02
43153--43186
8
4.2
8
89
10
52
11
11
0
76
1.02
43190--43254
12
5.4
12
80
5
51
23
0
7
69
1.14
43119--43240
6
20.5
6
79
6
70
16
5
5
72
1.24
44205--44256
27
2.0
26
88
3
77
73
1
17
7
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45294--45339
25
1.9
23
86
8
65
34
4
4
56
1.39
47666--47716
23
2.3
23
79
3
59
50
13
25
9
1.72
48720--48761
21
2.0
20
86
4
57
28
28
11
30
1.92

Tables:   1

The End!