Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010692.1 Kokia drynarioides strain JFW-HI SEQ_125639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64231

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7400--7424
11
2.3
11
100
0
50
92
0
8
0
0.40
12825--12863
20
2.0
20
84
0
51
41
25
2
30
1.69
14977--15170
97
2.0
97
100
0
388
37
26
13
22
1.91
17715--17754
19
2.1
19
90
0
62
52
15
7
25
1.68
20181--20239
2
29.0
2
96
3
109
49
1
0
49
1.11
20958--21014
29
2.0
29
86
6
82
54
12
7
26
1.63
21743--21784
2
21.0
2
100
0
84
50
0
0
50
1.00
27218--27244
12
2.2
12
100
0
54
55
22
0
22
1.44
26948--27822
295
3.0
295
97
0
1642
40
18
11
29
1.85
27513--27539
12
2.2
12
100
0
54
55
22
0
22
1.44
28006--28041
3
12.0
3
88
11
56
0
33
0
66
0.92
27999--28041
15
2.9
15
89
6
61
0
32
2
65
1.06
33516--33591
27
2.5
32
71
24
90
22
3
44
28
1.70
33529--33660
27
4.9
27
78
10
162
25
5
43
26
1.76
34180--34314
59
2.3
59
84
0
171
24
15
12
47
1.80
34450--34559
58
1.9
58
84
0
148
48
12
12
26
1.77
34511--34589
31
2.5
31
76
11
81
49
11
11
27
1.73
35640--35682
21
2.0
22
81
4
52
65
2
6
25
1.30
40220--40270
20
2.5
20
75
6
50
68
1
1
27
1.11
41257--41305
20
2.4
21
79
3
55
55
6
0
38
1.25
41526--41550
11
2.3
11
100
0
50
92
0
0
8
0.40
42000--42052
24
2.2
24
83
6
63
32
1
5
60
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43296--43340
18
2.4
19
77
3
56
60
6
4
28
1.42
43356--43398
20
2.2
19
84
12
52
62
4
4
27
1.35
43450--43487
20
1.9
20
84
10
51
78
0
7
13
0.94
43450--43488
21
1.9
20
84
5
51
79
0
7
12
0.93
43573--43619
17
2.8
17
83
0
58
38
2
4
55
1.31
43577--43643
34
2.0
33
82
11
82
34
2
8
53
1.47
43761--43797
15
2.5
15
81
0
56
40
32
8
18
1.80
44409--44451
3
14.7
3
90
4
70
67
2
0
30
1.03
44751--44808
28
2.1
28
100
0
116
68
6
17
6
1.34
45640--45833
29
6.7
27
73
15
124
34
27
3
35
1.73
45636--45833
58
3.4
59
85
6
246
34
27
3
34
1.72
47727--47767
15
2.6
16
81
14
50
75
2
7
14
1.12
55715--55773
17
3.5
17
71
17
59
45
3
0
50
1.18
55718--55785
34
2.0
34
94
0
118
45
7
0
47
1.31

Tables:   1

The End!