Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010693.1 Kokia drynarioides strain JFW-HI SEQ_125640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70081

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8920--8970
10
5.1
10
84
11
52
82
0
13
3
0.81
8917--8959
16
2.8
15
86
13
61
83
0
13
2
0.74
8917--8968
16
3.3
15
81
5
59
84
0
13
1
0.70
13036--13072
17
2.2
17
90
0
56
45
18
13
21
1.84
15883--15924
19
2.2
19
83
8
50
64
7
4
23
1.38
21732--21779
22
2.2
22
92
0
78
31
16
12
39
1.86
21787--21840
12
4.6
12
79
4
56
18
14
16
50
1.79
21787--21840
24
2.3
23
87
3
72
18
14
16
50
1.79
21808--21839
11
2.8
11
95
4
55
15
18
15
50
1.79
21883--21911
4
7.2
4
100
0
58
24
0
24
51
1.48
22721--22765
22
2.0
22
100
0
90
46
13
4
35
1.63
24891--24932
21
2.0
21
90
0
66
40
16
7
35
1.76
27106--27184
24
3.2
24
78
1
77
29
21
18
30
1.97
31662--31702
21
2.0
21
85
0
55
2
29
9
58
1.43
40775--40823
20
2.3
20
86
10
62
48
26
0
24
1.51
42703--42819
55
2.1
55
82
6
139
29
29
17
23
1.97
46320--46365
21
2.2
21
92
3
76
50
17
8
23
1.74
46811--46879
18
3.8
18
84
3
95
44
14
17
23
1.85
48036--48081
22
2.1
22
100
0
92
21
8
0
69
1.15
48036--48076
10
3.9
10
87
12
64
21
7
0
70
1.11
50675--50712
18
2.2
18
86
9
53
39
10
23
26
1.87
65122--65206
44
1.9
44
100
0
170
15
25
14
44
1.84

Tables:   1

The End!