Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001073.1 Kokia drynarioides strain JFW-HI SEQ_112329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15226

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2912--3095
28
6.4
27
68
13
73
38
22
2
36
1.69
2889--3049
59
2.8
58
79
5
173
36
21
1
39
1.65
2988--3386
86
4.6
85
75
10
267
35
27
4
33
1.77
2889--3366
30
16.5
29
71
12
245
35
25
3
34
1.74
3085--3394
59
5.4
57
75
10
247
34
28
4
31
1.77
3092--3386
29
10.2
28
75
8
175
35
28
4
31
1.78
3035--3371
28
11.7
28
73
10
148
35
27
4
32
1.78
3235--3414
87
2.1
86
82
7
213
37
28
3
30
1.75
3402--3466
30
2.2
31
86
5
89
36
16
4
41
1.70
5892--6177
95
3.0
95
98
0
554
36
17
6
39
1.76
7611--7748
43
3.2
43
81
2
170
26
27
18
28
1.98
10611--10758
58
2.5
58
82
7
158
35
7
29
28
1.84
10670--10767
29
3.4
30
73
10
105
36
4
30
28
1.76
10670--10768
30
3.4
30
73
9
96
37
4
30
28
1.75
10671--10786
59
2.0
58
86
1
160
37
3
29
29
1.74
10796--10920
59
2.1
59
86
2
171
40
4
23
32
1.73
10825--10920
29
3.3
29
76
13
115
40
2
23
33
1.67
11579--11635
17
3.4
17
81
13
73
52
1
1
43
1.21
14110--14146
19
2.0
19
94
5
67
27
5
13
54
1.61

Tables:   1

The End!