Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010756.1 Kokia drynarioides strain JFW-HI SEQ_125714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71879

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1579--1896
29
10.9
28
68
20
188
30
32
6
30
1.83
1579--1920
60
5.8
59
90
2
483
30
31
7
31
1.84
3970--4023
20
2.7
20
85
5
65
27
7
31
33
1.84
8104--8161
20
3.2
17
75
15
53
63
5
12
18
1.46
8773--8929
20
7.8
20
73
0
107
52
8
15
24
1.70
8786--8937
40
3.8
40
78
0
160
53
9
15
21
1.70
8844--9113
137
1.9
139
78
9
293
54
7
14
23
1.66
9172--9217
20
2.4
19
81
3
56
67
0
6
26
1.15
9284--9330
20
2.3
20
85
7
60
57
17
10
14
1.65
9664--9716
27
2.0
27
85
3
72
43
0
16
39
1.49
18167--18234
28
2.3
30
82
12
79
5
20
1
72
1.14
21693--21735
20
2.1
21
83
12
54
58
2
0
39
1.11
23694--23844
37
4.1
37
89
1
216
25
8
26
39
1.84
25199--25233
13
2.6
13
86
4
52
0
17
0
82
0.66
25715--25773
19
3.2
18
79
9
66
33
6
0
59
1.24
34648--34720
17
4.3
17
79
6
85
45
1
1
52
1.18
34646--34726
6
14.2
6
70
14
55
45
1
2
50
1.22
34646--34720
34
2.2
34
85
4
107
45
1
1
52
1.17
35744--35890
77
1.9
77
88
2
224
19
25
44
10
1.82
41056--41100
22
2.0
23
83
12
58
53
24
6
15
1.66
47206--47247
21
2.0
21
95
0
75
80
2
14
2
0.90
47206--47239
11
3.2
11
83
8
52
82
2
14
0
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47209--47247
10
3.8
10
83
6
51
82
2
12
2
0.89
48288--48619
49
6.8
47
67
13
152
32
15
32
19
1.93
48193--48692
147
3.4
147
80
3
520
33
15
30
19
1.93
48547--48662
48
2.4
49
81
5
119
31
11
36
21
1.89
49072--49460
38
10.4
39
72
13
239
33
24
16
25
1.96
49398--49482
38
2.2
38
91
0
134
37
18
17
25
1.93
52811--53445
298
2.1
298
93
0
1072
42
7
12
37
1.72
55582--55626
18
2.3
20
77
14
58
40
0
0
60
0.97
55600--55673
24
3.1
24
78
18
75
33
2
0
63
1.09
55586--55645
19
3.2
20
79
11
65
38
1
0
60
1.07
58193--58226
14
2.4
14
90
0
50
47
2
2
47
1.32
62871--62920
22
2.2
24
82
7
59
40
0
16
44
1.47
66741--66795
22
2.5
23
77
11
62
49
3
0
47
1.19
70090--70130
21
2.0
20
86
13
57
51
2
2
43
1.28
70135--70182
18
2.6
17
78
12
51
56
0
0
43
0.99
71639--71690
2
26.0
2
100
0
104
50
0
0
50
1.00

Tables:   1

The End!