Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010792.1 Kokia drynarioides strain JFW-HI SEQ_125759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  152671

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95--312
111
2.0
110
99
0
418
38
12
7
41
1.71
1237--1343
17
6.1
17
78
12
92
50
2
2
43
1.31
1264--1343
6
13.5
6
74
7
74
53
2
2
41
1.27
1323--1364
12
3.7
11
84
12
50
52
11
0
35
1.38
1714--2162
206
2.2
206
86
1
648
22
22
18
35
1.96
2129--2199
37
1.9
37
88
0
106
28
22
15
33
1.95
1923--2404
243
2.0
243
89
0
748
22
22
19
35
1.96
2166--2824
206
3.3
204
80
5
752
22
22
19
35
1.96
14000--14180
96
1.9
96
83
4
240
39
13
17
30
1.87
14410--14929
59
8.8
58
78
10
275
35
5
24
33
1.80
14510--14888
29
12.9
29
71
18
161
34
5
25
34
1.79
14510--14756
118
2.1
117
87
3
352
34
6
25
33
1.83
14560--14935
88
4.3
87
74
12
302
35
5
24
34
1.79
14570--14898
29
11.2
29
72
11
224
34
5
24
35
1.78
16769--16827
17
3.5
17
79
6
66
45
3
3
47
1.36
16783--16830
6
8.3
6
77
9
55
52
2
2
43
1.24
16783--16830
17
2.8
17
90
0
69
52
2
2
43
1.24
17750--17792
21
2.0
22
86
4
61
48
0
2
48
1.14
20342--20406
9
7.3
9
73
16
55
69
1
3
26
1.12
20459--20501
22
2.0
22
85
0
59
41
27
2
27
1.68
41958--42012
21
2.6
21
83
8
67
18
1
1
78
0.94
44692--44737
21
2.2
21
84
0
56
76
2
6
15
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44757--44838
6
13.0
6
89
7
103
14
6
0
79
0.92
49793--49915
61
2.0
61
98
0
237
31
17
21
29
1.96
50242--50300
2
31.0
2
80
10
61
47
1
1
49
1.21
55592--55738
58
2.5
58
83
6
190
45
1
2
51
1.21
55824--55917
44
2.1
45
88
9
140
38
28
2
30
1.69
55899--55954
16
3.5
16
90
0
85
30
32
5
32
1.80
61604--61647
17
2.8
16
82
6
54
31
15
0
52
1.44
61677--61877
100
2.0
100
96
0
366
33
9
16
39
1.82
88912--88942
14
2.1
15
94
5
55
32
19
6
41
1.77
93044--93101
26
2.2
26
90
6
91
34
0
5
60
1.19
95858--95886
10
2.9
10
100
0
58
6
31
0
62
1.22
112205--112269
24
2.8
24
83
2
78
43
20
13
23
1.87
112201--112271
23
3.0
23
81
4
88
43
18
12
25
1.85
113249--113306
21
2.8
20
84
10
71
29
17
18
34
1.94
121234--121348
58
2.0
58
91
3
187
49
23
4
22
1.67
122435--122461
14
1.9
14
100
0
54
29
7
3
59
1.42
133770--133836
23
2.8
23
86
4
80
77
1
13
7
1.04
134858--134903
25
1.9
25
86
8
69
32
4
6
56
1.45
136282--136311
8
3.8
8
90
0
51
46
36
0
16
1.47
147779--147854
24
3.2
24
75
7
82
35
23
7
32
1.84
152468--152572
17
6.1
17
82
2
111
41
1
1
54
1.22
152467--152581
35
3.3
34
83
2
122
42
1
1
53
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152499--152576
6
13.5
6
72
12
65
43
2
1
52
1.23
152467--152581
52
2.2
52
86
6
153
42
1
1
53
1.21
152519--152574
11
4.9
11
78
10
51
41
1
1
55
1.21
152519--152595
35
2.2
34
86
6
102
44
2
2
50
1.29

Tables:   1

The End!