Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010806.1 Kokia drynarioides strain JFW-HI SEQ_125773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103385

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--140
2
16.0
2
100
0
64
50
0
0
50
1.00
14816--14850
17
2.0
18
88
5
54
57
2
20
20
1.54
19451--19519
31
2.2
31
84
0
93
26
15
13
44
1.83
19741--19885
57
2.5
57
82
5
168
51
10
13
24
1.73
20947--20993
24
2.0
24
91
0
76
42
4
0
53
1.20
27697--28520
228
3.6
228
86
1
1055
30
22
24
22
1.99
31884--33250
228
6.0
228
80
4
1055
28
22
25
23
1.99
31884--33250
456
3.0
451
80
3
1405
28
22
25
23
1.99
52675--52726
24
2.2
24
79
3
61
55
0
7
36
1.29
60279--60338
29
2.0
31
87
6
88
35
10
15
40
1.80
69282--69356
3
25.0
3
100
0
150
66
0
33
0
0.92
69360--69628
137
2.0
138
94
0
477
45
8
7
38
1.62
79739--79805
31
2.2
31
91
0
107
31
17
2
47
1.63
83417--83517
32
3.2
32
78
10
91
45
1
1
50
1.24
83439--83517
32
2.5
33
81
6
92
46
0
1
51
1.08
95014--95063
23
2.3
21
75
6
55
22
6
8
64
1.43
95484--95554
37
1.9
37
91
0
115
38
15
18
28
1.91
101148--101930
259
3.0
259
94
0
1334
32
18
22
26
1.97

Tables:   1

The End!