Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001081.1 Kokia drynarioides strain JFW-HI SEQ_112337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15537

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
710--785
17
4.4
17
88
5
109
40
0
3
55
1.18
750--799
24
2.1
24
84
0
73
44
0
2
54
1.11
725--791
6
11.5
6
73
12
59
40
0
2
56
1.14
1493--1613
3
39.0
3
77
6
107
57
3
1
38
1.25
2710--3117
29
14.0
29
69
17
179
34
24
1
38
1.66
2742--3177
146
3.0
146
79
8
420
34
24
2
39
1.68
2710--3117
59
7.0
59
75
11
295
34
24
1
38
1.66
3160--3224
28
2.3
29
78
10
71
33
30
7
27
1.85
7959--8038
23
3.5
22
77
3
79
37
27
21
13
1.91
8036--8103
21
3.1
21
85
8
91
44
22
25
8
1.81
8045--8105
23
2.7
23
90
5
90
47
22
21
8
1.77
8187--8234
24
1.9
26
84
16
66
31
20
2
45
1.63
10424--10496
33
2.3
32
81
6
85
31
17
15
35
1.91
10434--10498
33
2.0
33
87
0
94
30
18
15
35
1.92
10840--10959
58
2.1
58
92
3
197
48
20
0
31
1.50
14942--14987
21
2.2
21
96
0
83
43
26
10
19
1.84
15450--15497
2
24.0
2
100
0
96
50
0
0
50
1.00

Tables:   1

The End!