Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010810.1 Kokia drynarioides strain JFW-HI SEQ_125777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  162367

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--812
424
1.9
422
90
1
1299
37
14
21
26
1.92
15860--15898
18
2.2
18
90
4
62
15
20
12
51
1.76
25837--25875
18
2.2
18
90
4
62
15
20
12
51
1.76
34645--34679
17
2.1
17
94
0
61
48
11
2
37
1.54
39805--40040
104
2.3
104
86
2
314
33
22
16
28
1.95
39811--40049
52
4.6
52
85
3
284
33
22
15
28
1.95
47110--47359
52
4.8
51
83
9
278
28
23
19
28
1.98
47110--47359
104
2.4
104
84
6
337
28
23
19
28
1.98
53745--53783
21
1.9
20
84
5
51
17
23
7
51
1.71
55446--55490
19
2.2
20
88
7
65
44
37
4
13
1.64
57698--57744
21
2.2
21
84
0
58
53
12
31
2
1.51
63607--63631
2
12.5
2
100
0
50
52
0
0
48
1.00
63615--63698
24
3.5
24
76
7
82
53
0
1
45
1.08
69057--69126
29
2.5
26
77
18
70
38
2
2
55
1.29
69139--69168
14
2.1
15
93
6
53
63
0
3
33
1.11
69180--69236
15
3.5
15
69
17
51
54
0
0
45
0.99
75235--75275
21
2.0
21
90
0
64
36
4
12
46
1.63
75805--75858
26
2.1
26
89
0
81
38
0
5
55
1.23
76171--76214
22
2.0
22
100
0
88
50
9
22
18
1.75
76268--76315
24
2.0
23
84
15
62
54
0
8
37
1.31
76300--76355
22
2.5
22
77
16
60
57
10
5
26
1.54
76311--76361
22
2.4
22
86
3
68
54
13
5
25
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76521--76570
17
2.9
17
84
0
64
32
0
2
66
1.03
93028--93053
11
2.4
11
100
0
52
0
34
0
65
0.93
94228--94265
19
2.1
19
85
14
53
78
7
5
7
1.07
95777--95851
29
2.5
28
81
12
78
37
4
9
49
1.54
95804--95866
29
2.1
29
82
8
74
33
9
9
47
1.68
97553--97592
19
2.2
18
90
4
62
65
0
15
20
1.28
101143--101199
19
2.8
21
79
12
57
42
1
5
50
1.35
101147--101199
20
2.7
19
80
8
61
41
1
5
50
1.36
127353--127387
17
2.1
17
89
10
54
54
14
17
14
1.72
143103--143167
20
3.2
20
77
0
76
20
35
18
26
1.95
143104--143191
40
2.2
40
84
8
108
19
31
19
29
1.96
145246--145285
14
2.8
15
81
14
57
32
12
10
45
1.75
156271--156338
26
2.4
29
76
7
79
60
5
5
27
1.43
158187--158240
15
3.3
15
76
18
63
44
0
0
55
0.99
158187--158246
17
3.6
16
72
27
54
45
0
0
55
0.99
158294--158329
19
2.0
17
89
10
54
63
0
2
33
1.08
158320--158375
22
2.6
22
83
5
62
51
0
0
48
1.00
158354--158386
16
2.1
16
94
0
57
45
0
3
51
1.16
158442--158467
9
2.9
9
100
0
52
42
0
0
57
0.98

Tables:   1

The End!