Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010815.1 Kokia drynarioides strain JFW-HI SEQ_125782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  184722

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6629--6670
16
2.6
16
88
0
66
21
23
0
54
1.44
8947--9089
69
2.1
69
100
0
286
28
17
23
30
1.97
9126--9158
10
3.7
9
84
15
50
33
0
0
66
0.92
9127--9168
16
2.4
18
84
11
52
35
0
0
64
0.94
19514--19565
23
2.3
22
78
15
61
34
3
11
50
1.57
19719--19767
25
2.0
25
96
4
91
67
4
8
20
1.34
20588--20920
39
8.4
39
80
5
373
24
18
30
26
1.98
20588--20920
78
4.2
78
86
4
436
24
18
30
26
1.98
21381--21595
48
4.4
47
76
5
178
18
30
18
33
1.95
21198--21605
50
8.3
50
72
7
199
18
29
16
35
1.93
22553--22603
26
2.0
26
84
0
66
7
17
0
74
1.05
27644--27675
3
10.7
3
100
0
64
65
0
0
34
0.93
30746--30896
23
6.5
23
77
12
130
43
21
24
10
1.84
30746--30896
48
3.2
46
80
9
139
43
21
24
10
1.84
34846--34903
30
2.0
29
82
3
71
22
37
0
39
1.54
35133--35173
20
2.0
21
86
13
59
21
26
0
51
1.48
38644--38674
8
3.9
8
95
0
53
25
0
32
41
1.56
40393--40606
56
3.8
56
79
5
227
21
16
24
38
1.93
40393--40606
28
7.6
28
77
4
189
21
16
24
38
1.93
46827--46854
2
14.0
2
100
0
56
50
0
0
50
1.00
55598--55655
28
2.1
28
100
0
116
36
20
17
25
1.94
59040--59322
28
10.1
28
83
0
287
19
19
25
36
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59040--59303
84
3.1
84
91
1
395
18
19
25
35
1.95
75045--75141
41
2.3
43
76
13
103
23
20
11
44
1.84
75225--75271
22
2.1
22
100
0
94
38
4
8
48
1.53
77006--77096
41
2.2
42
88
5
132
19
19
18
41
1.90
77142--77239
40
2.5
40
88
6
137
21
18
15
44
1.86
77910--77955
18
2.5
19
75
10
51
67
0
0
32
0.91
95986--96011
7
3.7
7
100
0
52
11
26
0
61
1.30
97420--97469
25
2.0
25
84
7
66
4
20
8
68
1.32
103826--104001
93
1.9
93
95
0
316
32
19
17
30
1.95
110190--110235
22
2.1
22
100
0
92
39
13
19
28
1.89
115689--115723
18
1.9
18
88
0
52
65
2
5
25
1.28
117906--118028
61
2.0
61
96
0
228
43
17
14
24
1.87
125426--125510
28
3.0
28
84
0
107
35
12
22
29
1.91
135381--135427
22
2.1
22
84
0
58
42
8
23
25
1.82
140743--140810
20
3.4
20
70
0
64
52
13
17
16
1.74
140724--140814
40
2.3
40
86
0
119
54
15
15
14
1.71
142074--142122
21
2.3
22
72
10
57
30
18
26
24
1.98
181447--181473
13
2.1
13
100
0
54
33
7
22
37
1.82

Tables:   1

The End!