Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010816.1 Kokia drynarioides strain JFW-HI SEQ_125783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56935

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7035--7098
7
9.6
7
77
11
55
40
17
21
20
1.91
7035--7098
20
3.2
19
80
4
65
40
17
21
20
1.91
7035--7091
13
4.3
13
80
8
62
42
17
21
19
1.90
7020--7101
40
2.0
40
88
4
121
37
17
24
20
1.93
7369--7537
84
2.0
83
96
2
320
31
26
21
20
1.97
9624--9706
38
2.2
38
87
6
116
50
0
1
48
1.08
10974--11002
14
2.0
15
93
6
51
48
0
3
48
1.18
11310--11368
9
6.4
9
70
18
50
49
0
0
50
1.00
11322--11400
17
4.0
21
66
21
62
51
1
0
46
1.08
11312--11399
37
2.3
39
86
3
126
50
1
0
48
1.08
13824--13853
14
2.1
14
93
0
51
16
6
3
73
1.18
18500--18551
20
2.8
18
78
21
63
51
3
1
42
1.31
20495--20527
17
1.9
18
88
11
52
51
15
3
30
1.58
22542--22877
139
2.4
139
82
8
414
30
2
17
50
1.59
24803--24832
2
15.0
2
100
0
60
50
0
0
50
1.00
29450--29491
22
1.9
22
90
0
66
45
14
2
38
1.58
39259--39294
9
3.8
9
86
13
54
36
0
13
50
1.43
39255--39294
20
2.0
20
100
0
80
35
0
15
50
1.44
39255--39289
11
3.4
11
84
15
56
34
0
17
48
1.47
48024--48083
29
2.1
29
93
0
102
15
31
38
15
1.88
52493--53721
308
4.0
308
91
0
1926
34
21
14
29
1.93
52493--53721
615
2.0
614
90
1
1953
34
21
14
29
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54896--54928
12
2.9
12
86
13
52
78
0
0
21
0.75
54897--54931
5
6.6
5
87
12
52
80
0
0
20
0.72
54885--54928
22
2.1
20
87
8
61
75
2
0
22
0.92

Tables:   1

The End!