Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010822.1 Kokia drynarioides strain JFW-HI SEQ_125789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54704

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
878--1090
39
5.4
39
80
5
189
25
14
19
39
1.90
878--1090
78
2.7
78
83
2
257
25
14
19
39
1.90
1356--1544
73
2.6
73
84
1
236
23
30
15
29
1.96
2776--2805
15
2.0
15
100
0
60
33
0
33
33
1.58
4049--4161
42
2.6
43
80
9
133
57
0
0
42
0.98
4070--4126
19
2.9
19
73
12
62
63
0
0
36
0.95
4076--4133
21
2.8
20
73
5
62
63
0
0
36
0.94
4621--4673
24
2.2
24
89
0
79
37
1
5
54
1.35
4760--4809
24
2.1
24
85
7
66
20
2
16
62
1.43
7554--7581
2
14.0
2
100
0
56
50
0
0
50
1.00
10119--10145
6
4.5
6
100
0
54
14
66
0
18
1.25
30146--30531
187
2.0
189
88
2
569
25
10
21
41
1.85
31650--31690
14
2.9
15
89
7
59
63
0
4
31
1.15
32052--32098
17
2.5
19
80
10
53
21
4
38
36
1.73
32381--32487
27
4.1
27
77
11
123
33
5
44
15
1.70
32425--32468
12
3.7
12
87
0
52
40
0
52
6
1.28
32483--32515
6
5.5
6
92
0
57
33
3
33
30
1.73
36703--36730
14
2.0
14
100
0
56
71
7
0
21
1.09
46950--46987
20
1.9
20
84
10
51
65
0
2
31
1.06
48083--48141
27
2.3
24
80
8
64
64
5
0
30
1.15

Tables:   1

The End!