Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010840.1 Kokia drynarioides strain JFW-HI SEQ_125807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  144851

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--43
2
21.5
2
90
0
68
44
0
4
51
1.22
9337--9374
20
1.9
20
89
10
60
15
13
21
50
1.78
13903--13945
16
2.8
15
75
3
50
41
25
2
30
1.68
20989--21033
19
2.4
19
88
3
65
40
2
0
57
1.11
21007--21044
18
2.1
19
85
9
53
42
0
0
57
0.98
25194--25219
13
2.0
13
100
0
52
92
0
7
0
0.39
27045--27096
25
2.0
25
81
3
59
23
9
11
55
1.64
39467--39562
6
17.0
6
70
23
75
43
2
1
53
1.19
39467--39563
17
5.8
17
81
4
117
43
2
1
53
1.19
39512--39562
23
2.2
21
93
6
66
47
0
0
52
1.00
40266--40351
9
9.6
9
89
0
82
65
9
0
25
1.22
40275--40351
3
25.7
3
97
0
91
66
9
0
24
1.21
44869--44917
24
2.0
24
96
0
89
40
10
8
40
1.69
45128--45179
23
2.3
23
83
3
70
59
1
7
30
1.36
45107--45179
22
3.3
23
79
7
71
58
2
6
31
1.38
45516--45545
3
10.0
3
100
0
60
66
0
0
33
0.92
45832--45871
6
6.7
6
100
0
80
0
32
15
52
1.43
48567--48606
21
1.9
21
94
0
71
40
7
5
47
1.54
49990--50043
22
2.3
24
78
12
60
70
22
5
1
1.18
49990--50112
34
3.6
33
75
12
97
68
20
4
6
1.31
49990--50112
57
2.1
56
80
15
128
68
20
4
6
1.31
50089--50143
21
2.7
19
78
13
56
67
16
7
9
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50089--50143
20
2.7
20
81
10
58
67
16
7
9
1.40
50097--50165
22
3.2
22
79
10
79
68
15
7
8
1.38
59563--59612
26
1.9
26
91
0
82
48
12
6
34
1.65
66778--66803
2
13.0
2
100
0
52
50
0
0
50
1.00
67097--67137
20
2.0
20
86
9
57
29
2
2
65
1.18
76370--76840
131
3.6
131
89
1
694
30
12
13
43
1.81
83687--83756
31
2.3
31
87
2
97
20
11
22
45
1.82
88816--88840
12
2.1
12
100
0
50
76
0
8
16
1.02
111728--111752
12
2.1
12
100
0
50
12
0
0
88
0.53
117438--117523
40
2.2
39
95
2
154
72
4
4
17
1.19
127526--127995
236
2.0
232
91
2
753
21
27
12
38
1.89
128744--128944
109
1.8
110
88
7
311
44
18
13
23
1.85
133492--133542
19
2.7
18
80
14
57
52
7
3
35
1.49
135306--135348
17
2.4
18
80
3
52
60
0
2
37
1.10
140704--140783
39
2.1
39
87
0
115
12
12
26
48
1.76

Tables:   1

The End!