Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010847.1 Kokia drynarioides strain JFW-HI SEQ_125814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  168491

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3288--3324
4
9.0
4
88
5
56
75
0
2
21
0.92
6043--6113
29
2.5
29
78
17
85
32
2
0
64
1.08
7294--7372
27
2.9
27
77
5
70
32
13
32
20
1.92
9235--9366
41
3.1
41
62
19
99
21
14
16
46
1.83
9225--9396
86
2.0
86
98
0
335
22
12
17
47
1.82
13306--13345
19
2.1
19
90
9
64
65
20
0
15
1.28
14092--14117
2
13.0
2
100
0
52
0
0
50
50
1.00
18275--18336
32
1.9
33
83
3
81
54
0
3
41
1.16
25294--25355
30
2.1
30
90
3
99
41
1
20
35
1.62
38178--38228
24
2.2
24
85
3
68
39
7
5
47
1.57
38618--38682
32
2.1
29
81
13
69
46
7
3
43
1.48
38998--39024
7
3.9
7
100
0
54
29
25
14
29
1.95
50711--50849
58
2.4
60
85
6
187
33
2
28
36
1.69
50711--50971
29
8.8
30
77
10
164
36
1
26
35
1.68
50739--50970
59
3.9
58
76
11
200
37
2
25
35
1.68
52711--52755
23
2.0
23
86
0
63
51
6
4
37
1.49
52735--52772
17
2.2
17
90
0
58
60
5
0
34
1.19
54186--54235
26
2.0
26
84
4
66
22
10
0
68
1.19
74675--74779
54
1.9
54
84
3
140
46
10
18
24
1.80
75410--75466
22
2.5
23
74
5
62
40
0
3
56
1.17
75401--75442
16
2.5
17
80
3
50
38
0
2
59
1.10
75444--75483
18
2.2
19
82
13
57
42
2
2
52
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75433--75499
17
3.9
17
82
5
73
43
2
1
52
1.25
77324--77705
29
13.0
29
73
6
279
33
29
4
32
1.77
77320--77670
59
6.0
59
85
2
404
33
28
4
33
1.78
86294--86649
186
1.9
189
85
8
494
37
13
10
37
1.80
87318--87366
15
3.5
15
75
16
59
61
2
4
32
1.26
87314--87374
27
2.3
26
83
5
86
63
1
3
31
1.20
87823--87859
9
3.8
10
83
16
51
21
8
0
70
1.13
87824--87867
20
2.3
18
88
7
61
22
6
0
70
1.11
88533--88597
28
2.4
27
82
7
78
26
1
1
70
1.04
90113--90162
22
2.3
22
78
0
55
56
8
12
24
1.62
92182--92224
21
2.0
21
95
0
77
37
18
16
27
1.92
92841--93075
129
1.8
128
90
0
380
37
7
7
48
1.60
98618--98647
15
2.1
14
93
6
51
36
0
6
56
1.26
98665--98703
15
2.6
16
84
8
55
61
0
0
38
0.96
102266--102317
26
2.0
26
92
0
86
26
7
26
38
1.83
111780--111812
16
2.1
16
88
11
50
45
0
6
48
1.27
117543--117567
12
2.1
12
100
0
50
0
16
0
84
0.63
118502--118550
25
2.0
25
95
0
89
24
4
0
71
1.03
132860--132895
17
2.1
17
89
0
54
47
0
0
52
1.00
137901--137948
23
2.1
22
81
11
53
66
10
6
16
1.41
140337--140387
24
2.1
24
88
0
75
27
23
31
17
1.97
144914--144972
31
1.9
31
85
0
82
44
13
10
32
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151135--151193
29
2.0
30
86
3
84
28
5
16
49
1.67
151139--151204
29
2.2
29
78
7
71
31
7
13
46
1.71
152727--152769
17
2.6
17
96
3
79
44
0
0
55
0.99
152733--152767
9
4.0
9
85
7
54
51
0
0
48
1.00
155785--155824
11
3.8
11
87
12
66
75
0
0
25
0.81
155784--155821
20
1.9
20
100
0
76
73
0
0
26
0.83
163328--163434
51
2.1
51
85
5
144
40
13
2
43
1.58

Tables:   1

The End!