Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010862.1 Kokia drynarioides strain JFW-HI SEQ_125830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24271

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--202
22
2.8
22
87
7
81
72
1
11
14
1.20
168--197
15
1.9
16
93
6
53
70
0
13
16
1.18
999--1041
19
2.3
19
84
8
52
58
4
0
37
1.19
3861--3917
21
2.8
21
83
2
62
31
14
14
40
1.85
5453--5513
22
2.8
22
87
7
81
72
1
11
14
1.20
5479--5508
15
1.9
16
93
6
53
70
0
13
16
1.18
6540--6568
10
3.0
10
95
5
51
17
10
0
72
1.11
8055--8095
18
2.2
19
91
4
66
19
12
12
56
1.67
11028--11078
22
2.3
22
79
0
57
23
29
21
25
1.99
12150--12201
23
2.3
22
77
9
52
21
1
11
65
1.34
14564--14921
58
6.2
57
76
9
289
32
26
4
37
1.76
14531--14874
29
11.7
29
70
16
194
31
25
4
38
1.75
14580--14880
116
2.6
115
79
8
333
30
27
4
38
1.76
14857--14922
29
2.3
29
86
0
87
36
28
4
30
1.77
19355--19388
11
3.0
11
86
4
50
82
0
17
0
0.67
19355--19386
12
2.5
13
95
5
57
87
0
12
0
0.54
20300--20368
12
6.2
11
77
15
54
79
4
13
2
0.99
20314--20384
21
3.3
21
75
21
67
80
4
14
1
0.93
20314--20369
16
3.3
16
83
14
60
80
5
14
0
0.88
20300--20380
26
3.1
25
77
15
76
80
3
12
3
0.98
20304--20382
31
2.6
30
74
18
74
81
3
11
3
0.96
21600--22526
49
19.1
48
70
11
471
38
20
25
16
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21561--22632
97
11.1
97
87
2
1284
38
20
24
16
1.92
22848--22908
31
1.9
32
90
3
97
14
32
24
27
1.95
23489--23589
17
5.9
16
72
13
58
35
4
3
55
1.40

Tables:   1

The End!