Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010869.1 Kokia drynarioides strain JFW-HI SEQ_125837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  237692

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
456--495
19
2.2
19
95
4
73
20
15
17
47
1.83
2643--2711
11
6.3
11
77
15
63
14
8
21
55
1.66
3828--3863
12
3.1
12
92
4
56
16
8
16
58
1.61
4135--4175
16
2.6
16
88
0
64
48
26
17
7
1.73
4872--4947
31
2.5
31
82
4
82
53
14
6
25
1.64
6786--6855
29
2.3
29
80
4
77
38
2
11
47
1.55
6807--6865
29
2.0
30
86
3
84
33
1
11
52
1.48
23140--23169
10
3.0
10
95
0
51
0
16
0
83
0.65
29450--29475
2
13.0
2
100
0
52
50
0
0
50
1.00
30592--30653
33
1.9
32
87
6
90
9
11
11
67
1.42
37161--37199
19
2.0
20
90
5
62
28
0
5
66
1.12
37228--37274
22
2.1
22
84
7
60
65
2
0
31
1.04
43123--43152
16
1.9
15
93
6
51
33
13
0
53
1.40
44898--44940
18
2.5
17
76
3
50
34
0
2
62
1.08
45054--45101
20
2.5
19
78
15
55
62
0
2
35
1.07
45408--45450
16
2.5
17
81
7
52
46
2
6
44
1.43
46614--46671
23
2.7
22
86
7
75
44
8
13
32
1.75
46623--46687
23
2.8
23
80
0
85
40
12
15
32
1.84
68703--68740
20
1.9
20
88
0
58
73
2
0
23
0.95
68668--68742
29
2.5
30
81
12
84
66
4
1
28
1.17
75968--75998
3
10.0
3
93
6
53
64
0
3
32
1.09
76331--76369
13
3.0
13
81
11
53
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77247--77288
15
2.8
15
79
13
50
33
0
2
64
1.07
82467--82496
2
15.0
2
100
0
60
50
0
0
50
1.00
91385--91450
31
2.2
31
86
8
91
46
4
4
43
1.44
94862--95048
102
1.8
101
81
5
234
41
13
11
33
1.80
97255--97292
19
2.0
20
84
5
51
60
2
2
34
1.24
108837--108927
38
2.4
38
83
5
103
27
12
16
43
1.83
125275--125317
21
2.1
21
83
12
54
25
13
16
44
1.85
144210--144269
20
3.1
19
83
9
77
46
3
0
50
1.18
144212--144277
11
6.4
11
73
25
54
43
3
0
53
1.16
144219--144334
9
12.1
9
71
19
51
37
3
1
56
1.26
144243--144311
19
3.8
18
75
17
54
40
2
0
56
1.14
146379--146431
27
2.0
27
81
7
63
30
1
1
66
1.13
155607--155661
27
2.1
25
86
6
74
16
3
1
78
0.98
158174--158269
50
1.9
50
91
0
156
35
20
12
31
1.90
158431--158860
202
2.1
203
91
2
704
38
10
18
32
1.85
167813--167856
21
2.0
21
83
12
54
36
4
0
59
1.18
191946--192010
34
1.9
34
96
0
121
38
13
10
36
1.80
202997--203037
21
1.9
22
85
5
57
21
4
12
60
1.50
207130--207300
85
2.0
85
98
0
333
39
5
24
30
1.77
208714--208747
15
2.2
16
89
5
52
64
0
2
32
1.08
209177--209225
17
3.1
16
77
11
57
30
2
16
51
1.56
221765--221830
32
2.1
32
100
0
132
21
22
3
53
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225796--225825
14
2.1
14
93
0
51
53
3
10
33
1.51

Tables:   1

The End!