Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010872.1 Kokia drynarioides strain JFW-HI SEQ_125840, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137820

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8616--8672
28
2.0
28
100
0
114
57
10
0
31
1.32
15871--16101
42
5.5
42
89
0
327
37
10
27
24
1.88
17502--17599
43
2.3
43
83
3
126
21
21
30
26
1.98
18263--18293
16
2.0
16
93
6
55
19
6
16
58
1.59
23498--23638
37
3.8
37
84
0
165
36
32
18
12
1.89
23541--23597
16
3.2
16
73
21
60
38
33
17
10
1.84
23498--23638
74
1.9
74
85
0
192
36
32
18
12
1.89
23628--23682
20
2.7
21
80
5
67
41
29
18
10
1.84
23653--23811
37
4.3
37
86
0
237
37
31
20
11
1.88
23559--23741
94
1.9
94
92
0
303
38
30
18
13
1.88
27028--27104
34
2.2
35
93
4
129
29
14
5
50
1.64
27452--27523
34
2.0
35
89
7
110
29
4
27
38
1.75
30955--31024
9
7.3
9
75
16
52
64
1
1
32
1.11
31530--31620
45
2.0
45
93
0
155
38
5
21
34
1.77
32521--32562
17
2.3
19
84
8
52
45
2
0
52
1.13
32751--32792
16
2.5
17
84
3
59
50
0
0
50
1.00
37067--37128
30
2.1
30
84
3
81
33
3
6
56
1.41
41505--41544
21
1.9
21
85
10
55
42
2
2
52
1.28
41736--41871
58
2.3
60
81
7
161
27
13
8
50
1.70
41749--41872
60
2.1
58
82
8
153
27
13
7
51
1.67
42101--42162
30
2.0
31
84
3
81
58
9
4
27
1.50
44748--44793
22
2.1
22
100
0
92
21
4
21
52
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50427--50486
26
2.3
26
79
0
75
40
1
3
55
1.27
56864--56917
18
2.9
18
88
2
72
68
1
0
29
1.00
57336--57405
22
3.2
21
77
15
79
5
2
17
74
1.14
57322--57405
24
3.6
23
80
7
98
5
3
19
71
1.22
57321--57405
46
1.9
45
88
7
129
5
3
18
71
1.21
57402--57520
12
10.2
12
77
5
102
9
5
17
68
1.35
58907--58976
20
3.3
20
69
18
61
41
4
4
50
1.42
59356--59395
6
6.8
6
94
5
73
67
0
0
32
0.91
59357--59393
11
3.3
11
92
7
65
67
0
0
32
0.91
59356--59395
17
2.3
18
95
4
73
67
0
0
32
0.91
62012--62048
18
2.1
18
90
5
58
27
2
16
54
1.56
89239--89297
21
2.8
21
82
7
66
30
25
16
27
1.97
89261--89309
21
2.3
21
78
0
53
30
24
14
30
1.94
102645--102683
17
2.2
18
90
4
62
15
17
12
53
1.72
103279--103312
10
3.3
10
87
4
50
79
2
17
0
0.86
111159--111206
21
2.3
21
78
10
53
27
25
16
31
1.97
111761--111850
45
2.0
45
97
0
171
35
14
13
36
1.85
120702--120743
17
2.4
18
80
4
50
57
9
11
21
1.63
120712--120755
18
2.5
18
85
3
54
59
11
11
18
1.61
120835--120883
20
2.5
19
86
3
62
2
26
12
59
1.44
131707--131760
25
2.1
26
86
3
74
57
11
1
29
1.44
133490--133516
4
6.8
4
100
0
54
77
0
0
22
0.76

Tables:   1

The End!