Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010880.1 Kokia drynarioides strain JFW-HI SEQ_125848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95135

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1263--1290
13
2.2
13
100
0
56
60
0
0
39
0.97
4189--4214
2
13.0
2
100
0
52
50
50
0
0
1.00
4388--4426
2
19.5
2
100
0
78
48
0
51
0
1.00
16446--16484
3
13.0
3
94
0
60
33
5
33
28
1.79
16202--16578
186
2.0
183
92
1
619
29
15
26
28
1.96
16601--16651
18
2.8
18
84
0
66
35
7
33
23
1.84
30455--30480
3
8.7
3
100
0
52
30
0
0
69
0.89
32806--32868
29
2.1
30
85
11
85
53
15
7
22
1.67
34409--34451
18
2.4
18
84
7
52
67
2
2
27
1.15
36813--37148
166
2.0
166
97
0
627
23
21
17
38
1.93
44213--44381
84
2.0
84
100
0
338
42
16
15
25
1.87
45667--45691
6
4.2
6
100
0
50
52
16
0
32
1.44
48337--48491
60
2.7
58
86
3
204
24
16
10
48
1.77
48404--48493
28
3.2
28
62
20
69
18
17
11
52
1.74
48663--48741
31
2.5
32
85
6
108
51
11
13
22
1.73
48663--48776
31
3.8
30
73
13
92
52
9
12
25
1.69
55240--55318
24
2.8
30
66
28
82
48
7
8
35
1.63
55240--55352
54
2.1
54
85
6
149
47
7
9
34
1.66
55758--55791
15
2.3
15
90
5
52
23
2
0
73
0.97
62291--62356
25
2.6
25
92
0
105
54
7
1
36
1.38
66152--66493
75
4.6
75
91
0
540
35
28
20
15
1.93
83320--83669
175
2.0
175
100
0
700
29
16
16
37
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84514--84563
21
2.3
22
86
13
68
36
4
0
60
1.16
84514--84572
23
2.6
23
84
12
70
37
3
0
59
1.14
84564--84657
47
2.0
47
85
6
127
45
1
2
51
1.20
86139--86170
16
2.0
16
93
0
55
28
18
3
50
1.62
90405--90447
19
2.3
19
100
0
86
18
16
13
51
1.77

Tables:   1

The End!