Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010882.1 Kokia drynarioides strain JFW-HI SEQ_125850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41607

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
590--673
29
2.9
29
92
0
141
28
15
16
39
1.89
651--1105
227
2.0
227
99
0
892
23
15
17
43
1.87
1802--1826
7
3.6
7
100
0
50
52
32
0
16
1.44
5095--5153
26
2.3
26
84
0
73
23
8
1
66
1.29
5274--5325
24
2.1
24
82
10
61
15
5
3
75
1.14
5464--5523
3
20.0
3
100
0
120
33
0
0
66
0.92
6368--6401
16
2.1
16
88
5
50
58
0
0
41
0.98
8498--8714
80
2.7
80
91
0
326
31
24
20
23
1.98
10195--10367
82
2.1
82
93
1
294
46
23
12
17
1.81
11825--11854
15
2.0
15
100
0
60
13
13
6
66
1.43
11954--12038
43
2.0
43
92
0
143
29
16
27
27
1.97
14083--14132
16
3.1
17
79
2
59
78
2
2
18
0.95
14072--14126
23
2.4
23
82
8
67
76
3
1
18
1.02
14336--14398
30
2.2
28
88
11
92
26
0
6
66
1.15
14336--14398
19
3.3
18
74
22
56
26
0
6
66
1.15
14442--14486
14
3.1
15
79
20
60
8
11
0
80
0.92
14732--14772
10
4.1
10
100
0
82
29
29
9
31
1.89
16626--16668
22
2.0
22
86
9
61
23
4
0
72
1.04
17460--17733
30
9.3
30
72
4
171
36
25
5
32
1.79
17497--17662
59
2.8
59
77
1
172
38
24
5
31
1.78
17555--17733
88
2.0
88
93
4
308
37
26
6
29
1.81
18634--18667
17
2.0
17
100
0
68
58
11
11
17
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18834--18859
7
3.7
7
100
0
52
0
11
0
88
0.52
21629--21677
22
2.1
23
85
7
64
26
24
0
48
1.51
23675--23774
6
17.5
6
73
16
79
42
3
0
55
1.15
23687--23759
38
1.9
38
94
5
130
38
4
0
57
1.18
23693--23771
11
7.2
11
72
18
58
43
3
0
53
1.19
23675--23782
17
6.1
16
78
17
99
42
2
0
53
1.21
25577--26008
29
14.8
28
77
8
357
37
24
2
35
1.69
25582--26031
58
7.7
57
81
9
486
37
24
2
35
1.70
25582--26129
175
3.1
175
84
6
625
35
24
3
36
1.72
29711--29758
21
2.3
21
96
0
87
18
41
22
16
1.90
37599--37831
50
4.7
49
69
12
152
39
24
24
11
1.88
37598--37884
100
2.9
100
92
0
457
40
22
24
12
1.88
37660--37822
50
3.3
49
72
10
168
37
23
26
12
1.90
38349--38404
6
9.5
6
73
11
53
39
3
0
57
1.16
38349--38404
17
3.2
17
92
5
85
39
3
0
57
1.16
38340--38412
29
2.6
28
82
4
92
39
2
2
54
1.29
39504--39868
29
12.7
29
73
14
292
36
23
3
36
1.73
39504--39986
59
8.3
59
78
9
392
34
23
4
37
1.76
41435--41465
3
10.3
3
100
0
62
32
0
0
67
0.91

Tables:   1

The End!