Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010892.1 Kokia drynarioides strain JFW-HI SEQ_125860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  124718

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--105
28
3.0
27
74
15
64
48
2
1
48
1.22
25--93
21
3.3
20
76
15
68
52
1
1
44
1.19
9915--9990
39
1.9
39
100
0
152
31
14
35
18
1.91
10330--10454
45
2.8
44
85
7
162
28
18
13
39
1.89
11699--11753
17
3.1
17
76
5
56
49
1
0
49
1.11
12208--12236
4
7.5
4
92
7
51
27
0
0
72
0.85
16624--16655
14
2.2
15
94
5
57
81
0
18
0
0.70
24873--24899
2
13.5
2
100
0
54
48
0
0
51
1.00
30304--30339
13
2.8
13
86
0
54
69
5
13
11
1.34
30874--30977
46
2.3
46
98
0
199
43
13
12
30
1.81
44998--45167
91
1.9
91
82
0
214
33
22
12
31
1.92
48768--49391
212
3.0
210
87
4
913
23
18
17
41
1.90
52713--52826
20
5.9
20
66
22
64
50
1
0
47
1.17
53762--53829
11
6.6
11
73
21
51
48
1
0
50
1.10
53760--53820
29
2.1
30
85
11
83
47
0
0
52
1.00
54477--54530
21
2.6
21
90
0
81
37
48
7
7
1.59
55530--55636
54
2.0
54
90
0
169
39
15
19
25
1.91
74176--74215
2
20.0
2
94
0
71
50
2
0
47
1.14
74319--74343
2
12.5
2
100
0
50
0
52
0
48
1.00
76037--76071
16
2.1
17
94
5
63
68
0
0
31
0.90
78403--78478
23
3.2
23
92
3
116
13
22
22
42
1.88
78372--78478
48
2.3
46
84
7
128
14
25
21
39
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82578--82735
23
6.8
23
78
7
158
12
22
20
44
1.84
82602--82750
23
6.4
23
78
8
106
11
24
18
44
1.83
84798--84824
3
9.0
3
100
0
54
66
0
33
0
0.92
85981--86040
26
2.3
26
83
8
79
61
6
1
30
1.31
87650--87682
3
11.0
3
100
0
66
33
0
0
66
0.92
97233--97294
17
3.6
17
78
8
63
48
3
1
46
1.28
97233--97276
6
7.5
6
82
5
54
47
2
2
47
1.27
97955--98083
3
43.0
3
78
9
129
60
2
2
34
1.22
98351--98396
20
2.2
22
84
7
60
78
2
15
4
1.01
99219--99439
30
7.5
29
76
9
173
36
22
2
38
1.67
99472--99526
28
1.9
29
82
10
69
32
30
5
30
1.80
99431--99603
29
5.9
30
69
18
98
28
27
8
35
1.85
99343--99603
58
4.5
57
75
12
171
30
26
6
36
1.81
99580--99641
28
2.2
28
88
0
88
33
30
9
25
1.88
102555--102631
38
2.0
38
94
0
136
31
10
20
37
1.87
111521--111561
20
2.0
20
85
0
55
46
7
19
26
1.76
118150--118180
15
2.0
16
93
6
55
25
0
0
74
0.82
118877--118927
22
2.2
24
79
10
61
70
3
1
23
1.14
118899--118934
18
2.1
17
89
5
54
72
5
2
19
1.17

Tables:   1

The End!