Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01001090.1 Kokia drynarioides strain JFW-HI SEQ_112350, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 673

Length: 1123
ACGTcount: A:0.34, C:0.19, G:0.20, T:0.27


Found at i:865 original size:26 final size:26

Alignment explanation


    Indices: 829--883  Score: 110
    Period size: 26  Copynumber: 2.1  Consensus size: 26

        819 CATTACCAAC

                                      
        829 ACACTTGAAATATGCTTTCCTAGGTG
          1 ACACTTGAAATATGCTTTCCTAGGTG

                                      
        855 ACACTTGAAATATGCTTTCCTAGGTG
          1 ACACTTGAAATATGCTTTCCTAGGTG

               
        881 ACA
          1 ACA

        884 ATGAAACATT


Statistics
Matches: 29,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  26   29  1.00

ACGTcount: A:0.29, C:0.20, G:0.18, T:0.33


Consensus pattern (26 bp):   
ACACTTGAAATATGCTTTCCTAGGTG
Done.