Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010904.1 Kokia drynarioides strain JFW-HI SEQ_125872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  159986

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9558--9604
24
1.9
25
86
4
69
42
2
0
55
1.12
14594--14621
14
2.0
14
100
0
56
50
0
0
50
1.00
15561--15773
106
2.0
106
97
0
399
45
11
7
35
1.69
19360--19386
5
5.4
5
100
0
54
81
0
0
18
0.69
19481--19542
30
2.1
29
81
3
70
27
1
19
51
1.56
31051--31084
17
1.9
17
88
5
50
70
0
0
29
0.87
31017--31117
18
5.3
18
68
27
50
62
0
1
34
1.13
36550--36599
24
2.1
24
85
7
66
54
6
6
34
1.50
39206--39324
59
2.0
59
85
0
157
36
10
14
39
1.79
50124--50459
168
2.0
168
96
1
620
26
18
11
43
1.84
62359--62448
30
3.0
30
76
10
94
25
6
15
52
1.67
65492--65531
20
2.0
20
100
0
80
50
5
30
15
1.65
68212--68253
19
2.3
18
84
11
59
50
7
0
42
1.30
68212--68249
18
2.2
18
86
13
53
52
7
0
39
1.31
71767--71793
2
13.5
2
100
0
54
48
0
0
51
1.00
71880--71905
2
13.0
2
100
0
52
50
0
0
50
1.00
74230--74269
17
2.2
19
86
8
57
37
0
2
60
1.11
74240--74277
17
2.2
17
86
13
51
34
0
0
65
0.93
75194--75328
71
1.9
71
98
0
261
31
14
15
38
1.87
83277--83310
17
1.9
18
88
5
52
29
2
0
67
1.05
83661--83895
96
2.5
95
93
0
389
37
5
14
41
1.71
83779--83841
29
2.2
29
88
5
92
31
7
11
49
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83803--83931
66
1.9
68
88
3
199
43
6
12
37
1.69
89889--89923
15
2.3
15
90
0
52
42
2
5
48
1.41
90781--90805
7
3.6
7
100
0
50
0
32
12
56
1.36
95287--95523
51
4.6
51
84
5
282
29
24
14
31
1.94
95287--95523
101
2.3
103
85
3
309
29
24
14
31
1.94
101331--101364
18
1.9
18
88
5
52
29
0
2
67
1.05
101475--101504
9
3.3
9
95
0
51
43
3
0
53
1.17
105132--105208
35
2.2
35
97
0
145
45
7
9
37
1.65
123281--123305
5
5.0
5
100
0
50
20
0
0
80
0.72
123283--123384
17
6.2
17
66
13
52
33
1
1
62
1.17
125061--125232
78
2.2
75
80
4
182
30
17
25
26
1.97
126099--126345
123
2.0
123
96
0
458
36
12
27
23
1.91
127449--127810
126
2.9
126
95
0
638
22
17
16
44
1.87
143612--143669
23
2.5
23
85
0
71
31
1
1
65
1.13
143610--143684
30
2.5
28
77
12
87
36
2
1
60
1.20
143673--143718
22
2.1
22
84
8
58
36
2
6
54
1.39
150764--150803
21
1.9
21
89
0
62
12
35
7
45
1.70
150774--150802
15
1.9
15
100
0
58
13
34
6
44
1.71
158240--158321
40
2.0
41
95
4
148
23
7
28
41
1.81

Tables:   1

The End!