Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010905.1 Kokia drynarioides strain JFW-HI SEQ_125873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20349

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2538--2598
27
2.2
27
88
2
86
18
21
8
52
1.71
5205--5265
27
2.2
27
88
2
86
18
21
8
52
1.71
5815--6502
190
3.5
191
88
3
873
35
21
23
19
1.96
6321--6678
186
1.9
186
87
3
524
37
20
24
18
1.94
6962--7018
17
3.4
16
79
13
53
38
1
5
54
1.33
6969--7018
23
2.2
23
82
13
59
38
2
6
54
1.37
7757--7787
13
2.4
13
94
0
53
48
6
0
45
1.28
8787--9157
30
12.9
29
68
17
184
32
31
3
32
1.75
8819--8920
50
2.0
50
90
0
159
34
29
1
34
1.69
8869--9158
59
4.9
59
87
1
395
32
32
3
31
1.76
10051--10136
37
2.3
38
87
2
120
51
1
1
46
1.16
11144--11236
38
2.5
38
87
5
127
46
3
0
50
1.17
12640--12749
51
2.2
49
87
4
166
55
0
13
30
1.45
14212--14245
16
2.1
16
88
5
50
55
0
8
35
1.31
15722--15825
40
2.6
41
79
11
108
39
1
0
57
1.16
15817--15858
19
2.2
19
83
8
50
35
2
2
59
1.23
17859--17900
17
2.5
17
92
3
68
23
4
4
66
1.30
17905--17934
11
2.7
11
100
0
60
36
6
6
50
1.55
18670--18713
12
3.7
12
81
0
52
25
25
34
15
1.95
18785--19514
390
1.9
389
82
4
918
28
26
19
26
1.98
20123--20159
13
2.7
13
91
8
56
81
0
18
0
0.70
20122--20205
28
3.3
24
73
16
62
70
1
28
0
0.95

Tables:   1

The End!