Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010920.1 Kokia drynarioides strain JFW-HI SEQ_125888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78679

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
625--672
24
1.9
26
84
16
66
45
0
22
31
1.53
735--904
23
7.3
23
80
11
127
11
25
22
39
1.88
7306--7360
25
2.2
23
76
17
56
47
5
1
45
1.36
7955--7994
20
2.1
19
90
4
62
60
0
2
37
1.11
12126--12175
20
2.5
20
76
0
55
26
22
34
18
1.96
19016--19050
4
8.8
4
87
12
54
25
0
22
51
1.48
24801--24843
22
1.9
23
85
4
61
51
0
25
23
1.49
25718--25862
59
2.5
57
83
3
173
53
10
11
24
1.68
25718--25862
58
2.5
58
85
2
175
53
10
11
24
1.68
26535--26586
15
3.8
14
85
14
65
57
0
0
42
0.98
26559--26634
37
2.1
37
87
5
109
51
0
1
47
1.09
27468--27545
38
2.1
38
92
0
129
51
1
0
47
1.09
30698--30723
6
4.3
6
100
0
52
50
15
0
34
1.45
40376--40411
18
1.9
19
88
5
56
33
11
19
36
1.87
40491--40538
20
2.4
20
85
0
60
27
10
12
50
1.73
41098--41132
18
1.9
18
94
0
61
8
11
8
71
1.31
41581--41685
31
3.5
30
67
15
81
32
22
7
37
1.83
41808--41855
24
2.0
24
95
0
87
37
31
0
31
1.58
42739--42787
13
3.8
12
81
10
53
40
24
2
32
1.67
47839--47901
27
2.3
27
91
0
99
22
7
19
50
1.72
47856--47916
27
2.2
27
82
2
68
21
11
13
54
1.70
50280--50328
18
2.8
17
76
11
62
44
0
2
53
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50287--50335
24
2.1
23
92
3
80
53
0
2
44
1.12
51376--51400
2
12.5
2
100
0
50
48
0
0
52
1.00
55404--55428
13
1.9
13
100
0
50
96
0
4
0
0.24
62848--62895
24
2.0
24
87
0
69
18
33
2
45
1.61
64025--64126
43
2.4
42
80
4
116
29
27
19
23
1.98
64148--64439
43
6.8
43
76
5
214
31
28
15
25
1.96
64149--64439
86
3.4
86
77
2
307
31
27
15
25
1.96
64197--64452
129
2.0
129
81
3
300
32
26
14
26
1.95
70686--70712
14
1.9
14
100
0
54
44
0
0
55
0.99
70678--70730
22
2.5
21
84
6
72
49
0
1
49
1.12
70671--70760
8
11.2
8
72
7
58
48
1
1
48
1.15
70548--70815
118
2.3
119
86
4
355
44
2
5
47
1.39
70768--70827
16
3.9
16
69
20
56
48
1
1
48
1.21
75559--75698
41
3.4
41
82
1
154
23
30
15
30
1.95
75689--75731
17
2.5
17
88
0
68
23
23
32
20
1.98
77686--77739
20
2.7
20
82
0
63
29
9
31
29
1.88

Tables:   1

The End!